Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC15.05■□□□□ -0
CKS1BP61024 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
CKS1BP61024 ALDH1A3-203ENST00000557963 1670 ntBASIC15.05■□□□□ -0
CKS1BP61024 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CKS1BP61024 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CKS1BP61024 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CKS1BP61024 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CKS1BP61024 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CKS1BP61024 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC15.05■□□□□ -0
CKS1BP61024 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CKS1BP61024 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC15.05■□□□□ -0
CKS1BP61024 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CKS1BP61024 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
CKS1BP61024 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CKS1BP61024 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC15.04■□□□□ -0
CKS1BP61024 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CKS1BP61024 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CKS1BP61024 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC15.04■□□□□ -0
CKS1BP61024 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC15.04■□□□□ -0
CKS1BP61024 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CKS1BP61024 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC15.04■□□□□ -0
CKS1BP61024 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC15.04■□□□□ -0
CKS1BP61024 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC15.04■□□□□ -0
CKS1BP61024 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC15.04■□□□□ -0
CKS1BP61024 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC15.04■□□□□ -0
CKS1BP61024 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
CKS1BP61024 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC15.04■□□□□ -0
CKS1BP61024 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CKS1BP61024 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC15.04■□□□□ -0
CKS1BP61024 AC011551.1-201ENST00000614101 683 ntBASIC15.04■□□□□ -0
CKS1BP61024 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
CKS1BP61024 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CKS1BP61024 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CKS1BP61024 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
CKS1BP61024 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC15.04■□□□□ -0
CKS1BP61024 GUSBP5-202ENST00000510805 1989 ntBASIC15.04■□□□□ -0
CKS1BP61024 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CKS1BP61024 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CKS1BP61024 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CKS1BP61024 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CKS1BP61024 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
CKS1BP61024 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CKS1BP61024 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CKS1BP61024 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CKS1BP61024 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CKS1BP61024 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CKS1BP61024 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CKS1BP61024 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CKS1BP61024 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15.03■□□□□ -0
CKS1BP61024 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CKS1BP61024 HYI-213ENST00000583037 1322 ntTSL 5 BASIC15.03■□□□□ -0
CKS1BP61024 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CKS1BP61024 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC15.03■□□□□ -0
CKS1BP61024 ABHD17AP3-201ENST00000503096 1137 ntBASIC15.03■□□□□ -0
CKS1BP61024 MBP-237ENST00000579129 1052 ntTSL 5 BASIC15.03■□□□□ -0
CKS1BP61024 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CKS1BP61024 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC15.03■□□□□ -0
CKS1BP61024 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CKS1BP61024 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CKS1BP61024 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC15.03■□□□□ -0
CKS1BP61024 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CKS1BP61024 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CKS1BP61024 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
CKS1BP61024 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
CKS1BP61024 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CKS1BP61024 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
CKS1BP61024 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC15.03■□□□□ -0
CKS1BP61024 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC15.03■□□□□ -0
CKS1BP61024 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CKS1BP61024 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC15.02■□□□□ -0
CKS1BP61024 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.02■□□□□ -0
CKS1BP61024 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC15.02■□□□□ -0
CKS1BP61024 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CKS1BP61024 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CKS1BP61024 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CKS1BP61024 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
CKS1BP61024 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CKS1BP61024 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CKS1BP61024 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CKS1BP61024 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CKS1BP61024 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CKS1BP61024 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CKS1BP61024 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CKS1BP61024 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC15.02□□□□□ -0.01
CKS1BP61024 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CKS1BP61024 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CKS1BP61024 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CKS1BP61024 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
CKS1BP61024 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
CKS1BP61024 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CKS1BP61024 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CKS1BP61024 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CKS1BP61024 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CKS1BP61024 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CKS1BP61024 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CKS1BP61024 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC15.01□□□□□ -0.01
CKS1BP61024 DUX4L9-201ENST00000449051 1259 ntBASIC15.01□□□□□ -0.01
CKS1BP61024 SPCS2P3-201ENST00000500401 656 ntBASIC15.01□□□□□ -0.01
CKS1BP61024 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CKS1BP61024 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms