Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDH12P55289 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CDH12P55289 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.15■□□□□ 0.82
CDH12P55289 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.15■□□□□ 0.82
CDH12P55289 MIR6724-1-201ENST00000616420 92 ntBASIC20.15■□□□□ 0.82
CDH12P55289 MIR6724-2-201ENST00000616483 92 ntBASIC20.15■□□□□ 0.82
CDH12P55289 MIR6724-4-201ENST00000617390 92 ntBASIC20.15■□□□□ 0.82
CDH12P55289 MIR6724-3-201ENST00000622482 92 ntBASIC20.15■□□□□ 0.82
CDH12P55289 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CDH12P55289 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDH12P55289 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.15■□□□□ 0.82
CDH12P55289 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.15■□□□□ 0.82
CDH12P55289 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDH12P55289 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDH12P55289 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDH12P55289 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.14■□□□□ 0.81
CDH12P55289 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.14■□□□□ 0.81
CDH12P55289 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDH12P55289 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDH12P55289 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.14■□□□□ 0.81
CDH12P55289 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDH12P55289 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDH12P55289 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDH12P55289 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDH12P55289 AC004687.1-201ENST00000579003 1625 ntBASIC20.13■□□□□ 0.81
CDH12P55289 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.13■□□□□ 0.81
CDH12P55289 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDH12P55289 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDH12P55289 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.13■□□□□ 0.81
CDH12P55289 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.13■□□□□ 0.81
CDH12P55289 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CDH12P55289 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.13■□□□□ 0.81
CDH12P55289 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDH12P55289 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.13■□□□□ 0.81
CDH12P55289 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.13■□□□□ 0.81
CDH12P55289 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
CDH12P55289 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDH12P55289 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.12■□□□□ 0.81
CDH12P55289 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.12■□□□□ 0.81
CDH12P55289 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDH12P55289 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDH12P55289 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDH12P55289 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDH12P55289 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDH12P55289 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CDH12P55289 AL035685.1-201ENST00000636663 812 ntBASIC20.12■□□□□ 0.81
CDH12P55289 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.12■□□□□ 0.81
CDH12P55289 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.12■□□□□ 0.81
CDH12P55289 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDH12P55289 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDH12P55289 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDH12P55289 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.11■□□□□ 0.81
CDH12P55289 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
CDH12P55289 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.11■□□□□ 0.81
CDH12P55289 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.11■□□□□ 0.81
CDH12P55289 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.11■□□□□ 0.81
CDH12P55289 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
CDH12P55289 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.11■□□□□ 0.81
CDH12P55289 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDH12P55289 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.11■□□□□ 0.81
CDH12P55289 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.11■□□□□ 0.81
CDH12P55289 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDH12P55289 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDH12P55289 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDH12P55289 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH12P55289 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH12P55289 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH12P55289 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDH12P55289 KRT16P3-201ENST00000439127 1283 ntBASIC20.1■□□□□ 0.81
CDH12P55289 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH12P55289 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.1■□□□□ 0.81
CDH12P55289 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CDH12P55289 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.1■□□□□ 0.81
CDH12P55289 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.1■□□□□ 0.81
CDH12P55289 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH12P55289 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.1■□□□□ 0.81
CDH12P55289 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH12P55289 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH12P55289 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH12P55289 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.09■□□□□ 0.81
CDH12P55289 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
CDH12P55289 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDH12P55289 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH12P55289 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
CDH12P55289 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDH12P55289 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.81
CDH12P55289 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDH12P55289 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.08■□□□□ 0.81
CDH12P55289 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CDH12P55289 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDH12P55289 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CDH12P55289 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDH12P55289 AL117332.1-201ENST00000622628 974 ntBASIC20.08■□□□□ 0.81
CDH12P55289 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.08■□□□□ 0.81
CDH12P55289 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDH12P55289 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.8
CDH12P55289 AC005229.4-201ENST00000610085 2198 ntBASIC20.08■□□□□ 0.8
CDH12P55289 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.08■□□□□ 0.8
CDH12P55289 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDH12P55289 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms