Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
NR1H2P55055 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.42■□□□□ 0.86
NR1H2P55055 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.42■□□□□ 0.86
NR1H2P55055 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.42■□□□□ 0.86
NR1H2P55055 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NR1H2P55055 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NR1H2P55055 AL157384.1-201ENST00000445995 2473 ntBASIC20.42■□□□□ 0.86
NR1H2P55055 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.42■□□□□ 0.86
NR1H2P55055 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
NR1H2P55055 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
NR1H2P55055 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
NR1H2P55055 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
NR1H2P55055 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.42■□□□□ 0.86
NR1H2P55055 AC010542.4-201ENST00000563151 1910 ntBASIC20.42■□□□□ 0.86
NR1H2P55055 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NR1H2P55055 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NR1H2P55055 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NR1H2P55055 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NR1H2P55055 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NR1H2P55055 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NR1H2P55055 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NR1H2P55055 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NR1H2P55055 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NR1H2P55055 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NR1H2P55055 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NR1H2P55055 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.41■□□□□ 0.86
NR1H2P55055 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
NR1H2P55055 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NR1H2P55055 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.41■□□□□ 0.86
NR1H2P55055 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
NR1H2P55055 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
NR1H2P55055 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NR1H2P55055 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
NR1H2P55055 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.41■□□□□ 0.86
NR1H2P55055 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
NR1H2P55055 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
NR1H2P55055 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NR1H2P55055 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NR1H2P55055 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
NR1H2P55055 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NR1H2P55055 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NR1H2P55055 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.4■□□□□ 0.86
NR1H2P55055 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.4■□□□□ 0.86
NR1H2P55055 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.4■□□□□ 0.86
NR1H2P55055 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
NR1H2P55055 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
NR1H2P55055 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
NR1H2P55055 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NR1H2P55055 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
NR1H2P55055 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NR1H2P55055 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
NR1H2P55055 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NR1H2P55055 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NR1H2P55055 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.39■□□□□ 0.85
NR1H2P55055 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
NR1H2P55055 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.39■□□□□ 0.85
NR1H2P55055 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.39■□□□□ 0.85
NR1H2P55055 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.39■□□□□ 0.85
NR1H2P55055 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.39■□□□□ 0.85
NR1H2P55055 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NR1H2P55055 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NR1H2P55055 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NR1H2P55055 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
NR1H2P55055 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.38■□□□□ 0.85
NR1H2P55055 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NR1H2P55055 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
NR1H2P55055 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NR1H2P55055 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
NR1H2P55055 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
NR1H2P55055 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NR1H2P55055 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NR1H2P55055 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.38■□□□□ 0.85
NR1H2P55055 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NR1H2P55055 MTDHP2-201ENST00000601468 714 ntBASIC20.38■□□□□ 0.85
NR1H2P55055 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NR1H2P55055 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.38■□□□□ 0.85
NR1H2P55055 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NR1H2P55055 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
NR1H2P55055 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NR1H2P55055 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
NR1H2P55055 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.38■□□□□ 0.85
NR1H2P55055 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
NR1H2P55055 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
NR1H2P55055 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NR1H2P55055 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
NR1H2P55055 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NR1H2P55055 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NR1H2P55055 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.37■□□□□ 0.85
NR1H2P55055 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NR1H2P55055 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
NR1H2P55055 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.37■□□□□ 0.85
NR1H2P55055 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
NR1H2P55055 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NR1H2P55055 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
NR1H2P55055 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.37■□□□□ 0.85
NR1H2P55055 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
NR1H2P55055 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
NR1H2P55055 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NR1H2P55055 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
NR1H2P55055 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms