Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CLCN2P51788 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.9■□□□□ 0.94
CLCN2P51788 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CLCN2P51788 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLCN2P51788 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.9■□□□□ 0.94
CLCN2P51788 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CLCN2P51788 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CLCN2P51788 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.9■□□□□ 0.94
CLCN2P51788 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLCN2P51788 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CLCN2P51788 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.9■□□□□ 0.94
CLCN2P51788 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLCN2P51788 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CLCN2P51788 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
CLCN2P51788 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CLCN2P51788 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CLCN2P51788 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CLCN2P51788 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CLCN2P51788 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLCN2P51788 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLCN2P51788 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLCN2P51788 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.89■□□□□ 0.93
CLCN2P51788 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.89■□□□□ 0.93
CLCN2P51788 PBX2P1-201ENST00000493219 1291 ntBASIC20.89■□□□□ 0.93
CLCN2P51788 AL136162.1-201ENST00000607711 1078 ntBASIC20.89■□□□□ 0.93
CLCN2P51788 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLCN2P51788 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.89■□□□□ 0.93
CLCN2P51788 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLCN2P51788 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.89■□□□□ 0.93
CLCN2P51788 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLCN2P51788 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CLCN2P51788 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLCN2P51788 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLCN2P51788 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.88■□□□□ 0.93
CLCN2P51788 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.88■□□□□ 0.93
CLCN2P51788 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLCN2P51788 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLCN2P51788 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
CLCN2P51788 MIR638-201ENST00000385237 100 ntBASIC20.88■□□□□ 0.93
CLCN2P51788 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CLCN2P51788 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLCN2P51788 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CLCN2P51788 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLCN2P51788 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLCN2P51788 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
CLCN2P51788 AC135279.3-201ENST00000610945 1311 ntBASIC20.87■□□□□ 0.93
CLCN2P51788 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLCN2P51788 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLCN2P51788 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLCN2P51788 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.87■□□□□ 0.93
CLCN2P51788 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLCN2P51788 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLCN2P51788 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.87■□□□□ 0.93
CLCN2P51788 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.87■□□□□ 0.93
CLCN2P51788 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CLCN2P51788 AC106739.1-201ENST00000617035 715 ntBASIC20.87■□□□□ 0.93
CLCN2P51788 AC009086.3-201ENST00000623486 1008 ntBASIC20.87■□□□□ 0.93
CLCN2P51788 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.87■□□□□ 0.93
CLCN2P51788 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.87■□□□□ 0.93
CLCN2P51788 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLCN2P51788 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLCN2P51788 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.87■□□□□ 0.93
CLCN2P51788 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLCN2P51788 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CLCN2P51788 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CLCN2P51788 AC133561.4-201ENST00000566112 224 ntBASIC20.86■□□□□ 0.93
CLCN2P51788 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.86■□□□□ 0.93
CLCN2P51788 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.86■□□□□ 0.93
CLCN2P51788 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CLCN2P51788 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.86■□□□□ 0.93
CLCN2P51788 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CLCN2P51788 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
CLCN2P51788 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLCN2P51788 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CLCN2P51788 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CLCN2P51788 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLCN2P51788 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.86■□□□□ 0.93
CLCN2P51788 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLCN2P51788 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.85■□□□□ 0.93
CLCN2P51788 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CLCN2P51788 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CLCN2P51788 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.85■□□□□ 0.93
CLCN2P51788 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLCN2P51788 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.85■□□□□ 0.93
CLCN2P51788 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLCN2P51788 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.85■□□□□ 0.93
CLCN2P51788 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLCN2P51788 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLCN2P51788 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.85■□□□□ 0.93
CLCN2P51788 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CLCN2P51788 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CLCN2P51788 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CLCN2P51788 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.84■□□□□ 0.93
CLCN2P51788 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.84■□□□□ 0.93
CLCN2P51788 AC024257.2-201ENST00000549699 147 ntBASIC20.84■□□□□ 0.93
CLCN2P51788 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CLCN2P51788 AL138724.1-201ENST00000606771 1088 ntBASIC20.84■□□□□ 0.93
CLCN2P51788 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLCN2P51788 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.84■□□□□ 0.93
CLCN2P51788 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms