Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AC092171.4-201ENST00000609130 632 ntBASIC20.11■□□□□ 0.81
RNF144AP50876 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.11■□□□□ 0.81
RNF144AP50876 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RNF144AP50876 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF144AP50876 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF144AP50876 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF144AP50876 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.11■□□□□ 0.81
RNF144AP50876 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.11■□□□□ 0.81
RNF144AP50876 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.11■□□□□ 0.81
RNF144AP50876 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
RNF144AP50876 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF144AP50876 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.1■□□□□ 0.81
RNF144AP50876 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RNF144AP50876 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RNF144AP50876 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
RNF144AP50876 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
RNF144AP50876 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.1■□□□□ 0.81
RNF144AP50876 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.1■□□□□ 0.81
RNF144AP50876 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
RNF144AP50876 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.1■□□□□ 0.81
RNF144AP50876 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF144AP50876 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF144AP50876 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RNF144AP50876 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF144AP50876 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF144AP50876 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF144AP50876 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF144AP50876 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.09■□□□□ 0.81
RNF144AP50876 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
RNF144AP50876 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF144AP50876 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
RNF144AP50876 SLC47A1P1-202ENST00000449666 945 ntBASIC20.09■□□□□ 0.81
RNF144AP50876 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.09■□□□□ 0.81
RNF144AP50876 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.09■□□□□ 0.81
RNF144AP50876 AC024257.2-201ENST00000549699 147 ntBASIC20.09■□□□□ 0.81
RNF144AP50876 AL136162.1-201ENST00000607711 1078 ntBASIC20.09■□□□□ 0.81
RNF144AP50876 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF144AP50876 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF144AP50876 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF144AP50876 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF144AP50876 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.08■□□□□ 0.81
RNF144AP50876 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RNF144AP50876 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.08■□□□□ 0.81
RNF144AP50876 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RNF144AP50876 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.08■□□□□ 0.81
RNF144AP50876 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.08■□□□□ 0.81
RNF144AP50876 MIR4767-201ENST00000582827 78 ntBASIC20.08■□□□□ 0.81
RNF144AP50876 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.08■□□□□ 0.81
RNF144AP50876 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
RNF144AP50876 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
RNF144AP50876 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
RNF144AP50876 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
RNF144AP50876 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RNF144AP50876 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
RNF144AP50876 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.08■□□□□ 0.8
RNF144AP50876 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF144AP50876 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF144AP50876 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF144AP50876 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
RNF144AP50876 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF144AP50876 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
RNF144AP50876 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF144AP50876 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.07■□□□□ 0.8
RNF144AP50876 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF144AP50876 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RNF144AP50876 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RNF144AP50876 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
RNF144AP50876 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.07■□□□□ 0.8
RNF144AP50876 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RNF144AP50876 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF144AP50876 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
RNF144AP50876 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF144AP50876 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF144AP50876 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RNF144AP50876 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF144AP50876 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF144AP50876 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
RNF144AP50876 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RNF144AP50876 AC136469.2-201ENST00000623944 1028 ntBASIC20.06■□□□□ 0.8
RNF144AP50876 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RNF144AP50876 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.06■□□□□ 0.8
RNF144AP50876 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RNF144AP50876 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RNF144AP50876 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
RNF144AP50876 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF144AP50876 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF144AP50876 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF144AP50876 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF144AP50876 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RNF144AP50876 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.05■□□□□ 0.8
RNF144AP50876 DUX4L19-201ENST00000557448 1267 ntBASIC20.05■□□□□ 0.8
RNF144AP50876 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.05■□□□□ 0.8
RNF144AP50876 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.05■□□□□ 0.8
RNF144AP50876 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
RNF144AP50876 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
RNF144AP50876 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF144AP50876 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF144AP50876 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF144AP50876 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF144AP50876 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms