Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
CPT1AP50416 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
CPT1AP50416 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CPT1AP50416 AC092068.2-201ENST00000590491 1708 ntBASIC24.22■■□□□ 1.47
CPT1AP50416 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
CPT1AP50416 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
CPT1AP50416 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CPT1AP50416 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CPT1AP50416 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC24.22■■□□□ 1.47
CPT1AP50416 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC24.22■■□□□ 1.47
CPT1AP50416 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC24.22■■□□□ 1.47
CPT1AP50416 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CPT1AP50416 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CPT1AP50416 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CPT1AP50416 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC24.21■■□□□ 1.47
CPT1AP50416 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
CPT1AP50416 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
CPT1AP50416 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CPT1AP50416 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC24.21■■□□□ 1.47
CPT1AP50416 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC24.21■■□□□ 1.47
CPT1AP50416 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC24.21■■□□□ 1.47
CPT1AP50416 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC24.21■■□□□ 1.47
CPT1AP50416 WT1-AS_3.1-201ENST00000613262 234 ntBASIC24.21■■□□□ 1.47
CPT1AP50416 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CPT1AP50416 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
CPT1AP50416 MFF-207ENST00000409565 1548 ntTSL 2 BASIC24.2■■□□□ 1.47
CPT1AP50416 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CPT1AP50416 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
CPT1AP50416 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC24.2■■□□□ 1.46
CPT1AP50416 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC24.2■■□□□ 1.46
CPT1AP50416 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC24.2■■□□□ 1.46
CPT1AP50416 AC231657.2-201ENST00000624556 255 ntBASIC24.2■■□□□ 1.46
CPT1AP50416 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC24.19■■□□□ 1.46
CPT1AP50416 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CPT1AP50416 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
CPT1AP50416 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
CPT1AP50416 PXK-203ENST00000383715 1756 ntTSL 5 BASIC24.19■■□□□ 1.46
CPT1AP50416 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CPT1AP50416 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC24.19■■□□□ 1.46
CPT1AP50416 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CPT1AP50416 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
CPT1AP50416 PARP1-202ENST00000366792 553 ntTSL 3 BASIC24.19■■□□□ 1.46
CPT1AP50416 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CPT1AP50416 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC24.19■■□□□ 1.46
CPT1AP50416 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC24.19■■□□□ 1.46
CPT1AP50416 UBE2DNL-204ENST00000602536 740 ntBASIC24.19■■□□□ 1.46
CPT1AP50416 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC24.19■■□□□ 1.46
CPT1AP50416 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC24.19■■□□□ 1.46
CPT1AP50416 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC24.19■■□□□ 1.46
CPT1AP50416 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CPT1AP50416 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CPT1AP50416 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
CPT1AP50416 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CPT1AP50416 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC24.18■■□□□ 1.46
CPT1AP50416 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
CPT1AP50416 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC24.18■■□□□ 1.46
CPT1AP50416 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC24.18■■□□□ 1.46
CPT1AP50416 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC24.18■■□□□ 1.46
CPT1AP50416 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
CPT1AP50416 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CPT1AP50416 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CPT1AP50416 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CPT1AP50416 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CPT1AP50416 AC079089.2-201ENST00000531211 1277 ntBASIC24.17■■□□□ 1.46
CPT1AP50416 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC24.17■■□□□ 1.46
CPT1AP50416 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC24.17■■□□□ 1.46
CPT1AP50416 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC24.17■■□□□ 1.46
CPT1AP50416 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC24.17■■□□□ 1.46
CPT1AP50416 LINC01960-201ENST00000563759 1884 ntBASIC24.17■■□□□ 1.46
CPT1AP50416 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CPT1AP50416 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
CPT1AP50416 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC24.16■■□□□ 1.46
CPT1AP50416 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CPT1AP50416 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CPT1AP50416 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CPT1AP50416 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
CPT1AP50416 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
CPT1AP50416 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CPT1AP50416 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC24.16■■□□□ 1.46
CPT1AP50416 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC24.16■■□□□ 1.46
CPT1AP50416 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC24.16■■□□□ 1.46
CPT1AP50416 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CPT1AP50416 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CPT1AP50416 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC24.16■■□□□ 1.46
CPT1AP50416 AP001160.3-201ENST00000601484 763 ntBASIC24.16■■□□□ 1.46
CPT1AP50416 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CPT1AP50416 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
CPT1AP50416 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CPT1AP50416 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CPT1AP50416 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CPT1AP50416 AC055733.4-201ENST00000638462 1354 ntBASIC24.16■■□□□ 1.46
CPT1AP50416 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
CPT1AP50416 AC007322.1-201ENST00000426983 750 ntBASIC24.15■■□□□ 1.46
CPT1AP50416 DUX4L16-201ENST00000555130 1264 ntBASIC24.15■■□□□ 1.46
CPT1AP50416 AL121832.2-201ENST00000610979 668 ntBASIC24.15■■□□□ 1.46
CPT1AP50416 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC24.15■■□□□ 1.46
CPT1AP50416 MAZ-216ENST00000616501 991 ntTSL 5 BASIC24.15■■□□□ 1.46
CPT1AP50416 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC24.15■■□□□ 1.46
CPT1AP50416 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
CPT1AP50416 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms