Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.46■□□□□ 0.87
CLK3P49761 AC080038.3-201ENST00000623346 1952 ntBASIC20.46■□□□□ 0.87
CLK3P49761 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLK3P49761 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLK3P49761 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLK3P49761 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLK3P49761 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.46■□□□□ 0.87
CLK3P49761 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CLK3P49761 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.46■□□□□ 0.87
CLK3P49761 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLK3P49761 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.87
CLK3P49761 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.45■□□□□ 0.86
CLK3P49761 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.45■□□□□ 0.86
CLK3P49761 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLK3P49761 AL353803.4-201ENST00000565882 1934 ntBASIC20.45■□□□□ 0.86
CLK3P49761 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.45■□□□□ 0.86
CLK3P49761 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLK3P49761 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CLK3P49761 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CLK3P49761 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.45■□□□□ 0.86
CLK3P49761 AC099791.2-201ENST00000605725 427 ntBASIC20.45■□□□□ 0.86
CLK3P49761 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.45■□□□□ 0.86
CLK3P49761 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
CLK3P49761 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CLK3P49761 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CLK3P49761 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLK3P49761 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.44■□□□□ 0.86
CLK3P49761 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CLK3P49761 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLK3P49761 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.44■□□□□ 0.86
CLK3P49761 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLK3P49761 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.44■□□□□ 0.86
CLK3P49761 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.44■□□□□ 0.86
CLK3P49761 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLK3P49761 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLK3P49761 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
CLK3P49761 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.43■□□□□ 0.86
CLK3P49761 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLK3P49761 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.43■□□□□ 0.86
CLK3P49761 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLK3P49761 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.43■□□□□ 0.86
CLK3P49761 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CLK3P49761 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.43■□□□□ 0.86
CLK3P49761 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
CLK3P49761 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CLK3P49761 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLK3P49761 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CLK3P49761 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.43■□□□□ 0.86
CLK3P49761 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLK3P49761 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CLK3P49761 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLK3P49761 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CLK3P49761 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.42■□□□□ 0.86
CLK3P49761 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLK3P49761 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.42■□□□□ 0.86
CLK3P49761 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
CLK3P49761 AL121603.2-201ENST00000557373 2117 ntBASIC20.42■□□□□ 0.86
CLK3P49761 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLK3P49761 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.42■□□□□ 0.86
CLK3P49761 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CLK3P49761 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLK3P49761 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
CLK3P49761 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.41■□□□□ 0.86
CLK3P49761 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLK3P49761 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLK3P49761 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLK3P49761 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLK3P49761 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLK3P49761 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.41■□□□□ 0.86
CLK3P49761 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.41■□□□□ 0.86
CLK3P49761 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLK3P49761 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.4■□□□□ 0.86
CLK3P49761 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.4■□□□□ 0.86
CLK3P49761 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CLK3P49761 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.4■□□□□ 0.86
CLK3P49761 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.4■□□□□ 0.86
CLK3P49761 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.4■□□□□ 0.86
CLK3P49761 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
CLK3P49761 SYT6-210ENST00000641643 1587 ntBASIC20.4■□□□□ 0.86
CLK3P49761 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLK3P49761 AC026310.3-201ENST00000625186 2373 ntBASIC20.39■□□□□ 0.86
CLK3P49761 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CLK3P49761 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.86
CLK3P49761 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CLK3P49761 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CLK3P49761 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CLK3P49761 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.39■□□□□ 0.85
CLK3P49761 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLK3P49761 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLK3P49761 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.39■□□□□ 0.85
CLK3P49761 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLK3P49761 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.39■□□□□ 0.85
CLK3P49761 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLK3P49761 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLK3P49761 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.39■□□□□ 0.85
CLK3P49761 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CLK3P49761 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLK3P49761 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.38■□□□□ 0.85
CLK3P49761 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLK3P49761 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms