Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CX3CR1P49238 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CX3CR1P49238 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.02■□□□□ 0.64
CX3CR1P49238 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.02■□□□□ 0.64
CX3CR1P49238 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CX3CR1P49238 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CX3CR1P49238 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CX3CR1P49238 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CX3CR1P49238 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CX3CR1P49238 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CX3CR1P49238 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.02■□□□□ 0.63
CX3CR1P49238 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CX3CR1P49238 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
CX3CR1P49238 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CX3CR1P49238 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.01■□□□□ 0.63
CX3CR1P49238 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.01■□□□□ 0.63
CX3CR1P49238 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CX3CR1P49238 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.01■□□□□ 0.63
CX3CR1P49238 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.01■□□□□ 0.63
CX3CR1P49238 AL512631.2-201ENST00000604634 923 ntBASIC19.01■□□□□ 0.63
CX3CR1P49238 AC092171.4-201ENST00000609130 632 ntBASIC19.01■□□□□ 0.63
CX3CR1P49238 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CX3CR1P49238 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CX3CR1P49238 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CX3CR1P49238 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CX3CR1P49238 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.01■□□□□ 0.63
CX3CR1P49238 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CX3CR1P49238 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
CX3CR1P49238 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CX3CR1P49238 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CX3CR1P49238 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CX3CR1P49238 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CX3CR1P49238 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CX3CR1P49238 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19■□□□□ 0.63
CX3CR1P49238 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19■□□□□ 0.63
CX3CR1P49238 MIR3181-201ENST00000578512 73 ntBASIC19■□□□□ 0.63
CX3CR1P49238 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19■□□□□ 0.63
CX3CR1P49238 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CX3CR1P49238 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CX3CR1P49238 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CX3CR1P49238 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CX3CR1P49238 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.99■□□□□ 0.63
CX3CR1P49238 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CX3CR1P49238 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CX3CR1P49238 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.99■□□□□ 0.63
CX3CR1P49238 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CX3CR1P49238 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CX3CR1P49238 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.99■□□□□ 0.63
CX3CR1P49238 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CX3CR1P49238 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.99■□□□□ 0.63
CX3CR1P49238 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.99■□□□□ 0.63
CX3CR1P49238 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CX3CR1P49238 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.99■□□□□ 0.63
CX3CR1P49238 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.99■□□□□ 0.63
CX3CR1P49238 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.99■□□□□ 0.63
CX3CR1P49238 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.99■□□□□ 0.63
CX3CR1P49238 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CX3CR1P49238 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CX3CR1P49238 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CX3CR1P49238 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CX3CR1P49238 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CX3CR1P49238 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CX3CR1P49238 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.98■□□□□ 0.63
CX3CR1P49238 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.98■□□□□ 0.63
CX3CR1P49238 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CX3CR1P49238 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.98■□□□□ 0.63
CX3CR1P49238 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CX3CR1P49238 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CX3CR1P49238 FBXW4P1-201ENST00000426721 2239 ntBASIC18.98■□□□□ 0.63
CX3CR1P49238 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CX3CR1P49238 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CX3CR1P49238 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.98■□□□□ 0.63
CX3CR1P49238 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.98■□□□□ 0.63
CX3CR1P49238 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CX3CR1P49238 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.98■□□□□ 0.63
CX3CR1P49238 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CX3CR1P49238 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CX3CR1P49238 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.97■□□□□ 0.63
CX3CR1P49238 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CX3CR1P49238 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CX3CR1P49238 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CX3CR1P49238 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CX3CR1P49238 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.97■□□□□ 0.63
CX3CR1P49238 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.97■□□□□ 0.63
CX3CR1P49238 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CX3CR1P49238 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CX3CR1P49238 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CX3CR1P49238 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CX3CR1P49238 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CX3CR1P49238 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.97■□□□□ 0.63
CX3CR1P49238 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.97■□□□□ 0.63
CX3CR1P49238 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.97■□□□□ 0.63
CX3CR1P49238 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.97■□□□□ 0.63
CX3CR1P49238 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.97■□□□□ 0.63
CX3CR1P49238 AL031602.1-201ENST00000633169 911 ntBASIC18.97■□□□□ 0.63
CX3CR1P49238 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CX3CR1P49238 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.97■□□□□ 0.63
CX3CR1P49238 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.97■□□□□ 0.63
CX3CR1P49238 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CX3CR1P49238 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms