Protein–RNA interactions for Protein: P33400

RIM101, pH-response transcription factor pacC/RIM101, yeastyeast

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RIM101P33400 SEC24YIL109C 2781 nt8.18□□□□□ -1.1
RIM101P33400 AVO1YOL078W 3531 nt8.18□□□□□ -1.1
RIM101P33400 YPD1YDL235C 504 nt8.18□□□□□ -1.1
RIM101P33400 YGL152CYGL152C 678 nt8.18□□□□□ -1.1
RIM101P33400 CBP4YGR174C 513 nt8.18□□□□□ -1.1
RIM101P33400 YKL033W-AYKL033W-A 711 nt8.18□□□□□ -1.1
RIM101P33400 YKL053WYKL053W 375 nt8.18□□□□□ -1.1
RIM101P33400 RPS1BYML063W 768 nt8.18□□□□□ -1.1
RIM101P33400 AAR2YBL074C 1068 nt8.18□□□□□ -1.1
RIM101P33400 YPL067CYPL067C 597 nt8.18□□□□□ -1.1
RIM101P33400 MBA1YBR185C 837 nt8.18□□□□□ -1.1
RIM101P33400 CEF1YMR213W 1773 nt8.17□□□□□ -1.1
RIM101P33400 MIC26YGR235C 702 nt8.17□□□□□ -1.1
RIM101P33400 YKL065W-AYKL065W-A 222 nt8.17□□□□□ -1.1
RIM101P33400 YRA2YKL214C 612 nt8.17□□□□□ -1.1
RIM101P33400 YLR361C-AYLR361C-A 297 nt8.17□□□□□ -1.1
RIM101P33400 RPS19AYOL121C 435 nt8.17□□□□□ -1.1
RIM101P33400 ATP3YBR039W 936 nt8.17□□□□□ -1.1
RIM101P33400 HXK2YGL253W 1461 nt8.17□□□□□ -1.1
RIM101P33400 APE1YKL103C 1545 nt8.17□□□□□ -1.1
RIM101P33400 POL4YCR014C 1749 nt8.17□□□□□ -1.1
RIM101P33400 HXT4YHR092C 1731 nt8.17□□□□□ -1.1
RIM101P33400 RTC5YOR118W 1704 nt8.17□□□□□ -1.1
RIM101P33400 SKO1YNL167C 1944 nt8.17□□□□□ -1.1
RIM101P33400 TDA3YHR009C 1572 nt8.16□□□□□ -1.1
RIM101P33400 YIL054WYIL054W 318 nt8.16□□□□□ -1.1
RIM101P33400 YJL119CYJL119C 324 nt8.16□□□□□ -1.1
RIM101P33400 DAD2YKR083C 402 nt8.16□□□□□ -1.1
RIM101P33400 YPR077CYPR077C 372 nt8.16□□□□□ -1.1
RIM101P33400 YIL177CYIL177C 5277 nt8.15□□□□□ -1.1
RIM101P33400 KRE2YDR483W 1329 nt8.15□□□□□ -1.1
RIM101P33400 ADE8YDR408C 645 nt8.15□□□□□ -1.1
RIM101P33400 SPO73YER046W 432 nt8.15□□□□□ -1.1
RIM101P33400 KRE1YNL322C 942 nt8.15□□□□□ -1.1
RIM101P33400 YPR039WYPR039W 336 nt8.15□□□□□ -1.1
RIM101P33400 PRB1YEL060C 1908 nt8.15□□□□□ -1.11
RIM101P33400 KTR5YNL029C 1569 nt8.14□□□□□ -1.11
RIM101P33400 UBP6YFR010W 1500 nt8.14□□□□□ -1.11
RIM101P33400 BRE2YLR015W 1518 nt8.14□□□□□ -1.11
RIM101P33400 DSS1YMR287C 2910 nt8.14□□□□□ -1.11
RIM101P33400 CBP1YJL209W 1965 nt8.14□□□□□ -1.11
RIM101P33400 YER137W-AYER137W-A 306 nt8.14□□□□□ -1.11
RIM101P33400 YJL015CYJL015C 285 nt8.14□□□□□ -1.11
RIM101P33400 RPL39YJL189W 156 nt8.14□□□□□ -1.11
RIM101P33400 SMA2YML066C 1110 nt8.14□□□□□ -1.11
RIM101P33400 INN1YNL152W 1230 nt8.14□□□□□ -1.11
RIM101P33400 PRE10YOR362C 867 nt8.14□□□□□ -1.11
RIM101P33400 YBR124WYBR124W 360 nt8.14□□□□□ -1.11
RIM101P33400 SRP101YDR292C 1866 nt8.14□□□□□ -1.11
RIM101P33400 APM2YHL019C 1818 nt8.14□□□□□ -1.11
RIM101P33400 EXO5YBR163W 1758 nt8.14□□□□□ -1.11
RIM101P33400 CTK1YKL139W 1587 nt8.14□□□□□ -1.11
RIM101P33400 PEX28YHR150W 1740 nt8.13□□□□□ -1.11
RIM101P33400 TDA2YER071C 381 nt8.13□□□□□ -1.11
RIM101P33400 YIL171W-AYIL171W-A 453 nt8.13□□□□□ -1.11
RIM101P33400 YJL220WYJL220W 453 nt8.13□□□□□ -1.11
RIM101P33400 YOR121CYOR121C 306 nt8.13□□□□□ -1.11
RIM101P33400 OLA1YBR025C 1185 nt8.13□□□□□ -1.11
RIM101P33400 INA17YPL099C 549 nt8.13□□□□□ -1.11
RIM101P33400 YBR090CYBR090C 369 nt8.13□□□□□ -1.11
RIM101P33400 PDC5YLR134W 1692 nt8.13□□□□□ -1.11
RIM101P33400 IOC4YMR044W 1428 nt8.12□□□□□ -1.11
RIM101P33400 ALT1YLR089C 1779 nt8.12□□□□□ -1.11
RIM101P33400 GLY1YEL046C 1164 nt8.12□□□□□ -1.11
RIM101P33400 YFL032WYFL032W 321 nt8.12□□□□□ -1.11
RIM101P33400 BNA6YFR047C 888 nt8.12□□□□□ -1.11
RIM101P33400 YHR182C-AYHR182C-A 474 nt8.12□□□□□ -1.11
RIM101P33400 YKL044WYKL044W 321 nt8.12□□□□□ -1.11
RIM101P33400 TPK3YKL166C 1197 nt8.12□□□□□ -1.11
RIM101P33400 BET5YML077W 480 nt8.12□□□□□ -1.11
RIM101P33400 YOR389WYOR389W 1875 nt8.12□□□□□ -1.11
RIM101P33400 YBR139WYBR139W 1527 nt8.12□□□□□ -1.11
RIM101P33400 TMS1YDR105C 1422 nt8.12□□□□□ -1.11
RIM101P33400 SUB2YDL084W 1341 nt8.11□□□□□ -1.11
RIM101P33400 YGR035W-AYGR035W-A 222 nt8.11□□□□□ -1.11
RIM101P33400 SPS100YHR139C 981 nt8.11□□□□□ -1.11
RIM101P33400 YJR128WYJR128W 360 nt8.11□□□□□ -1.11
RIM101P33400 YML031C-AYML031C-A 336 nt8.11□□□□□ -1.11
RIM101P33400 ISF1YMR081C 1017 nt8.11□□□□□ -1.11
RIM101P33400 CDC33YOL139C 642 nt8.11□□□□□ -1.11
RIM101P33400 SRB6YBR253W 366 nt8.11□□□□□ -1.11
RIM101P33400 ASH1YKL185W 1767 nt8.1□□□□□ -1.11
RIM101P33400 GCD2YGR083C 1956 nt8.1□□□□□ -1.11
RIM101P33400 SSC1YJR045C 1965 nt8.1□□□□□ -1.11
RIM101P33400 YDL109CYDL109C 1944 nt8.1□□□□□ -1.11
RIM101P33400 STE5YDR103W 2754 nt8.1□□□□□ -1.11
RIM101P33400 ARF2YDL137W 546 nt8.1□□□□□ -1.11
RIM101P33400 tA(AGC)DtA(AGC)D 73 nt8.1□□□□□ -1.11
RIM101P33400 tA(AGC)FtA(AGC)F 73 nt8.1□□□□□ -1.11
RIM101P33400 tA(AGC)GtA(AGC)G 73 nt8.1□□□□□ -1.11
RIM101P33400 tA(AGC)HtA(AGC)H 73 nt8.1□□□□□ -1.11
RIM101P33400 tA(AGC)JtA(AGC)J 73 nt8.1□□□□□ -1.11
RIM101P33400 tA(AGC)K1tA(AGC)K1 73 nt8.1□□□□□ -1.11
RIM101P33400 tA(AGC)K2tA(AGC)K2 73 nt8.1□□□□□ -1.11
RIM101P33400 tA(AGC)LtA(AGC)L 73 nt8.1□□□□□ -1.11
RIM101P33400 tA(AGC)M1tA(AGC)M1 73 nt8.1□□□□□ -1.11
RIM101P33400 tA(AGC)M2tA(AGC)M2 73 nt8.1□□□□□ -1.11
RIM101P33400 tA(AGC)PtA(AGC)P 73 nt8.1□□□□□ -1.11
RIM101P33400 ADH3YMR083W 1128 nt8.1□□□□□ -1.11
RIM101P33400 RAD14YMR201C 1116 nt8.1□□□□□ -1.11
Retrieved 100 of 7,029 protein–RNA pairs in 21.2 ms