Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 PLD4-205ENST00000553861 667 ntTSL 2 BASIC24.53■■□□□ 1.52
CIITAP33076 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC24.53■■□□□ 1.52
CIITAP33076 AC087623.3-201ENST00000607047 1098 ntBASIC24.53■■□□□ 1.52
CIITAP33076 RAB43-208ENST00000615093 783 ntTSL 5 BASIC24.53■■□□□ 1.52
CIITAP33076 GALC-202ENST00000393568 2054 ntTSL 2 BASIC24.53■■□□□ 1.52
CIITAP33076 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
CIITAP33076 OR7E47P-201ENST00000546390 1422 ntBASIC24.52■■□□□ 1.52
CIITAP33076 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
CIITAP33076 ASL-203ENST00000380839 1765 ntTSL 5 BASIC24.52■■□□□ 1.52
CIITAP33076 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CIITAP33076 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC24.52■■□□□ 1.52
CIITAP33076 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC24.52■■□□□ 1.52
CIITAP33076 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CIITAP33076 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC24.52■■□□□ 1.52
CIITAP33076 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
CIITAP33076 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CIITAP33076 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC24.51■■□□□ 1.51
CIITAP33076 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CIITAP33076 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CIITAP33076 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC24.51■■□□□ 1.51
CIITAP33076 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
CIITAP33076 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
CIITAP33076 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
CIITAP33076 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
CIITAP33076 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
CIITAP33076 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC24.51■■□□□ 1.51
CIITAP33076 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CIITAP33076 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CIITAP33076 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
CIITAP33076 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
CIITAP33076 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CIITAP33076 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CIITAP33076 TERF1P2-201ENST00000583350 1212 ntBASIC24.5■■□□□ 1.51
CIITAP33076 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CIITAP33076 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
CIITAP33076 LINC02228-203ENST00000641970 1355 ntBASIC24.5■■□□□ 1.51
CIITAP33076 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CIITAP33076 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CIITAP33076 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC24.5■■□□□ 1.51
CIITAP33076 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
CIITAP33076 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC24.49■■□□□ 1.51
CIITAP33076 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
CIITAP33076 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CIITAP33076 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC24.49■■□□□ 1.51
CIITAP33076 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
CIITAP33076 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CIITAP33076 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CIITAP33076 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CIITAP33076 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
CIITAP33076 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
CIITAP33076 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC24.48■■□□□ 1.51
CIITAP33076 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
CIITAP33076 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC24.48■■□□□ 1.51
CIITAP33076 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC24.48■■□□□ 1.51
CIITAP33076 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC24.48■■□□□ 1.51
CIITAP33076 AC080038.3-201ENST00000623346 1952 ntBASIC24.48■■□□□ 1.51
CIITAP33076 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CIITAP33076 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CIITAP33076 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CIITAP33076 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CIITAP33076 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC24.47■■□□□ 1.51
CIITAP33076 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC24.47■■□□□ 1.51
CIITAP33076 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
CIITAP33076 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC24.47■■□□□ 1.51
CIITAP33076 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
CIITAP33076 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC24.47■■□□□ 1.51
CIITAP33076 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC24.47■■□□□ 1.51
CIITAP33076 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC24.47■■□□□ 1.51
CIITAP33076 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CIITAP33076 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CIITAP33076 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CIITAP33076 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CIITAP33076 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC24.46■■□□□ 1.51
CIITAP33076 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC24.46■■□□□ 1.51
CIITAP33076 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CIITAP33076 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CIITAP33076 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC24.46■■□□□ 1.51
CIITAP33076 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CIITAP33076 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CIITAP33076 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
CIITAP33076 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CIITAP33076 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
CIITAP33076 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC24.46■■□□□ 1.51
CIITAP33076 CCDC92B-201ENST00000575506 885 ntBASIC24.46■■□□□ 1.51
CIITAP33076 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
CIITAP33076 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CIITAP33076 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
CIITAP33076 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CIITAP33076 AC009237.3-201ENST00000393279 1427 ntBASIC24.45■■□□□ 1.51
CIITAP33076 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CIITAP33076 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
CIITAP33076 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC24.45■■□□□ 1.5
CIITAP33076 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
CIITAP33076 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
CIITAP33076 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC24.45■■□□□ 1.5
CIITAP33076 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC24.45■■□□□ 1.5
CIITAP33076 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CIITAP33076 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CIITAP33076 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC24.45■■□□□ 1.5
CIITAP33076 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms