Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTPN6P29350 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTPN6P29350 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PTPN6P29350 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.59■□□□□ 0.89
PTPN6P29350 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PTPN6P29350 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PTPN6P29350 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
PTPN6P29350 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
PTPN6P29350 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
PTPN6P29350 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
PTPN6P29350 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
PTPN6P29350 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PTPN6P29350 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PTPN6P29350 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
PTPN6P29350 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PTPN6P29350 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PTPN6P29350 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PTPN6P29350 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTPN6P29350 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTPN6P29350 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTPN6P29350 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTPN6P29350 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTPN6P29350 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
PTPN6P29350 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN6P29350 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN6P29350 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN6P29350 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN6P29350 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN6P29350 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN6P29350 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN6P29350 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.56■□□□□ 0.88
PTPN6P29350 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN6P29350 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN6P29350 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.56■□□□□ 0.88
PTPN6P29350 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
PTPN6P29350 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN6P29350 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN6P29350 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN6P29350 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN6P29350 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.56■□□□□ 0.88
PTPN6P29350 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN6P29350 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN6P29350 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN6P29350 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PTPN6P29350 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTPN6P29350 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTPN6P29350 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.55■□□□□ 0.88
PTPN6P29350 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTPN6P29350 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTPN6P29350 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
PTPN6P29350 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTPN6P29350 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTPN6P29350 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PTPN6P29350 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.55■□□□□ 0.88
PTPN6P29350 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.55■□□□□ 0.88
PTPN6P29350 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.55■□□□□ 0.88
PTPN6P29350 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PTPN6P29350 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
PTPN6P29350 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.55■□□□□ 0.88
PTPN6P29350 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.55■□□□□ 0.88
PTPN6P29350 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTPN6P29350 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTPN6P29350 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTPN6P29350 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
PTPN6P29350 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.54■□□□□ 0.88
PTPN6P29350 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PTPN6P29350 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTPN6P29350 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.54■□□□□ 0.88
PTPN6P29350 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.54■□□□□ 0.88
PTPN6P29350 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.54■□□□□ 0.88
PTPN6P29350 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PTPN6P29350 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PTPN6P29350 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTPN6P29350 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.54■□□□□ 0.88
PTPN6P29350 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.54■□□□□ 0.88
PTPN6P29350 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.54■□□□□ 0.88
PTPN6P29350 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
PTPN6P29350 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTPN6P29350 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN6P29350 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.53■□□□□ 0.88
PTPN6P29350 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PTPN6P29350 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN6P29350 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN6P29350 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN6P29350 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.53■□□□□ 0.88
PTPN6P29350 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.53■□□□□ 0.88
PTPN6P29350 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.53■□□□□ 0.88
PTPN6P29350 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN6P29350 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN6P29350 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN6P29350 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PTPN6P29350 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN6P29350 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
PTPN6P29350 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN6P29350 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTPN6P29350 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.52■□□□□ 0.88
PTPN6P29350 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTPN6P29350 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
PTPN6P29350 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTPN6P29350 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms