Protein–RNA interactions for Protein: P23942

PRPH2, Peripherin-2, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPH2P23942 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRPH2P23942 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRPH2P23942 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.71■□□□□ 0.91
PRPH2P23942 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.7■□□□□ 0.9
PRPH2P23942 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PRPH2P23942 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PRPH2P23942 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRPH2P23942 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRPH2P23942 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.7■□□□□ 0.9
PRPH2P23942 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.7■□□□□ 0.9
PRPH2P23942 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRPH2P23942 AL356441.2-201ENST00000443009 864 ntBASIC20.7■□□□□ 0.9
PRPH2P23942 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRPH2P23942 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
PRPH2P23942 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
PRPH2P23942 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRPH2P23942 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRPH2P23942 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.7■□□□□ 0.9
PRPH2P23942 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRPH2P23942 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRPH2P23942 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRPH2P23942 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.69■□□□□ 0.9
PRPH2P23942 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRPH2P23942 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.69■□□□□ 0.9
PRPH2P23942 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRPH2P23942 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRPH2P23942 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.69■□□□□ 0.9
PRPH2P23942 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.69■□□□□ 0.9
PRPH2P23942 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.69■□□□□ 0.9
PRPH2P23942 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.69■□□□□ 0.9
PRPH2P23942 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
PRPH2P23942 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PRPH2P23942 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRPH2P23942 OR7E47P-201ENST00000546390 1422 ntBASIC20.69■□□□□ 0.9
PRPH2P23942 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRPH2P23942 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
PRPH2P23942 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
PRPH2P23942 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRPH2P23942 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.68■□□□□ 0.9
PRPH2P23942 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
PRPH2P23942 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRPH2P23942 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.68■□□□□ 0.9
PRPH2P23942 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRPH2P23942 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.68■□□□□ 0.9
PRPH2P23942 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PRPH2P23942 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PRPH2P23942 AC087239.1-201ENST00000622671 572 ntBASIC20.68■□□□□ 0.9
PRPH2P23942 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.68■□□□□ 0.9
PRPH2P23942 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
PRPH2P23942 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PRPH2P23942 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PRPH2P23942 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PRPH2P23942 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PRPH2P23942 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PRPH2P23942 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRPH2P23942 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PRPH2P23942 DUX4L19-201ENST00000557448 1267 ntBASIC20.67■□□□□ 0.9
PRPH2P23942 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.67■□□□□ 0.9
PRPH2P23942 AC026310.3-201ENST00000625186 2373 ntBASIC20.67■□□□□ 0.9
PRPH2P23942 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PRPH2P23942 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRPH2P23942 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRPH2P23942 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.67■□□□□ 0.9
PRPH2P23942 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PRPH2P23942 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PRPH2P23942 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PRPH2P23942 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRPH2P23942 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PRPH2P23942 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.66■□□□□ 0.9
PRPH2P23942 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.66■□□□□ 0.9
PRPH2P23942 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.66■□□□□ 0.9
PRPH2P23942 AC010141.3-201ENST00000456659 717 ntBASIC20.66■□□□□ 0.9
PRPH2P23942 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRPH2P23942 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.66■□□□□ 0.9
PRPH2P23942 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.66■□□□□ 0.9
PRPH2P23942 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRPH2P23942 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRPH2P23942 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.65■□□□□ 0.9
PRPH2P23942 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PRPH2P23942 SERBP1P1-201ENST00000396021 1160 ntBASIC20.65■□□□□ 0.9
PRPH2P23942 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PRPH2P23942 MIR4466-201ENST00000606121 54 ntBASIC20.65■□□□□ 0.9
PRPH2P23942 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
PRPH2P23942 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.64■□□□□ 0.9
PRPH2P23942 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.64■□□□□ 0.89
PRPH2P23942 AC010525.1-201ENST00000585559 441 ntBASIC20.64■□□□□ 0.89
PRPH2P23942 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PRPH2P23942 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.64■□□□□ 0.89
PRPH2P23942 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRPH2P23942 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
PRPH2P23942 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.89
PRPH2P23942 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.63■□□□□ 0.89
PRPH2P23942 OXCT2P1-201ENST00000447263 1535 ntBASIC20.63■□□□□ 0.89
PRPH2P23942 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRPH2P23942 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
PRPH2P23942 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRPH2P23942 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRPH2P23942 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.63■□□□□ 0.89
PRPH2P23942 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.63■□□□□ 0.89
PRPH2P23942 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms