Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCL1P22362 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCL1P22362 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCL1P22362 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCL1P22362 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CCL1P22362 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.71■□□□□ 0.59
CCL1P22362 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCL1P22362 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCL1P22362 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CCL1P22362 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CCL1P22362 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.71■□□□□ 0.59
CCL1P22362 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
CCL1P22362 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.71■□□□□ 0.59
CCL1P22362 SRD5A1P1-201ENST00000442297 786 ntBASIC18.71■□□□□ 0.59
CCL1P22362 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCL1P22362 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCL1P22362 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.71■□□□□ 0.59
CCL1P22362 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCL1P22362 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCL1P22362 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.7■□□□□ 0.58
CCL1P22362 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.7■□□□□ 0.58
CCL1P22362 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCL1P22362 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCL1P22362 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCL1P22362 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.7■□□□□ 0.58
CCL1P22362 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.7■□□□□ 0.58
CCL1P22362 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.7■□□□□ 0.58
CCL1P22362 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.7■□□□□ 0.58
CCL1P22362 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CCL1P22362 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CCL1P22362 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.69■□□□□ 0.58
CCL1P22362 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CCL1P22362 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCL1P22362 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CCL1P22362 OR7E47P-201ENST00000546390 1422 ntBASIC18.69■□□□□ 0.58
CCL1P22362 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.69■□□□□ 0.58
CCL1P22362 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CCL1P22362 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.69■□□□□ 0.58
CCL1P22362 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.69■□□□□ 0.58
CCL1P22362 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.69■□□□□ 0.58
CCL1P22362 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCL1P22362 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCL1P22362 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCL1P22362 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.69■□□□□ 0.58
CCL1P22362 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CCL1P22362 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.69■□□□□ 0.58
CCL1P22362 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
CCL1P22362 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCL1P22362 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCL1P22362 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.68■□□□□ 0.58
CCL1P22362 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCL1P22362 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCL1P22362 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCL1P22362 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCL1P22362 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CCL1P22362 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CCL1P22362 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CCL1P22362 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCL1P22362 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCL1P22362 AL137060.1-201ENST00000618151 2648 ntBASIC18.68■□□□□ 0.58
CCL1P22362 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.68■□□□□ 0.58
CCL1P22362 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CCL1P22362 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.67■□□□□ 0.58
CCL1P22362 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCL1P22362 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.67■□□□□ 0.58
CCL1P22362 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCL1P22362 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCL1P22362 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCL1P22362 AC087239.1-201ENST00000622671 572 ntBASIC18.67■□□□□ 0.58
CCL1P22362 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.67■□□□□ 0.58
CCL1P22362 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.67■□□□□ 0.58
CCL1P22362 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCL1P22362 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCL1P22362 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCL1P22362 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CCL1P22362 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.67■□□□□ 0.58
CCL1P22362 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCL1P22362 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCL1P22362 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.66■□□□□ 0.58
CCL1P22362 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCL1P22362 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCL1P22362 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCL1P22362 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.66■□□□□ 0.58
CCL1P22362 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.66■□□□□ 0.58
CCL1P22362 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.66■□□□□ 0.58
CCL1P22362 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.66■□□□□ 0.58
CCL1P22362 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCL1P22362 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.66■□□□□ 0.58
CCL1P22362 AL138724.1-201ENST00000606771 1088 ntBASIC18.66■□□□□ 0.58
CCL1P22362 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
CCL1P22362 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCL1P22362 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCL1P22362 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
CCL1P22362 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CCL1P22362 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CCL1P22362 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.65■□□□□ 0.58
CCL1P22362 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCL1P22362 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCL1P22362 AC010141.3-201ENST00000456659 717 ntBASIC18.65■□□□□ 0.58
CCL1P22362 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms