Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
MSR1P21757 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.15■□□□□ 0.66
MSR1P21757 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.15■□□□□ 0.66
MSR1P21757 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
MSR1P21757 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
MSR1P21757 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
MSR1P21757 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
MSR1P21757 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
MSR1P21757 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MSR1P21757 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MSR1P21757 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
MSR1P21757 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
MSR1P21757 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.14■□□□□ 0.65
MSR1P21757 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
MSR1P21757 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
MSR1P21757 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
MSR1P21757 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.14■□□□□ 0.65
MSR1P21757 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
MSR1P21757 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MSR1P21757 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MSR1P21757 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
MSR1P21757 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MSR1P21757 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
MSR1P21757 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
MSR1P21757 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
MSR1P21757 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MSR1P21757 UNC93B3-201ENST00000308076 687 ntBASIC19.13■□□□□ 0.65
MSR1P21757 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.13■□□□□ 0.65
MSR1P21757 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MSR1P21757 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
MSR1P21757 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MSR1P21757 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MSR1P21757 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MSR1P21757 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
MSR1P21757 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
MSR1P21757 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.13■□□□□ 0.65
MSR1P21757 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MSR1P21757 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MSR1P21757 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
MSR1P21757 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
MSR1P21757 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MSR1P21757 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MSR1P21757 C11orf96-202ENST00000528572 1834 ntBASIC19.12■□□□□ 0.65
MSR1P21757 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.12■□□□□ 0.65
MSR1P21757 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
MSR1P21757 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MSR1P21757 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
MSR1P21757 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.12■□□□□ 0.65
MSR1P21757 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
MSR1P21757 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MSR1P21757 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MSR1P21757 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.12■□□□□ 0.65
MSR1P21757 AC079089.2-201ENST00000531211 1277 ntBASIC19.12■□□□□ 0.65
MSR1P21757 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.12■□□□□ 0.65
MSR1P21757 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MSR1P21757 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MSR1P21757 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.12■□□□□ 0.65
MSR1P21757 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
MSR1P21757 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MSR1P21757 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
MSR1P21757 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
MSR1P21757 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
MSR1P21757 SLC47A1P1-202ENST00000449666 945 ntBASIC19.11■□□□□ 0.65
MSR1P21757 AC010141.3-201ENST00000456659 717 ntBASIC19.11■□□□□ 0.65
MSR1P21757 AL136162.1-201ENST00000607711 1078 ntBASIC19.11■□□□□ 0.65
MSR1P21757 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.11■□□□□ 0.65
MSR1P21757 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MSR1P21757 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
MSR1P21757 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
MSR1P21757 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MSR1P21757 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MSR1P21757 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MSR1P21757 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.1■□□□□ 0.65
MSR1P21757 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.1■□□□□ 0.65
MSR1P21757 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
MSR1P21757 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MSR1P21757 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MSR1P21757 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.1■□□□□ 0.65
MSR1P21757 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MSR1P21757 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.1■□□□□ 0.65
MSR1P21757 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MSR1P21757 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MSR1P21757 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MSR1P21757 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MSR1P21757 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MSR1P21757 PKD1P6-201ENST00000343738 4769 ntBASIC19.09■□□□□ 0.65
MSR1P21757 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MSR1P21757 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MSR1P21757 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MSR1P21757 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
MSR1P21757 AC135279.3-201ENST00000610945 1311 ntBASIC19.09■□□□□ 0.65
MSR1P21757 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.09■□□□□ 0.65
MSR1P21757 AP005435.1-201ENST00000529293 1178 ntBASIC19.09■□□□□ 0.65
MSR1P21757 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.09■□□□□ 0.65
MSR1P21757 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.09■□□□□ 0.65
MSR1P21757 AC024257.2-201ENST00000549699 147 ntBASIC19.09■□□□□ 0.65
MSR1P21757 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MSR1P21757 MIR4767-201ENST00000582827 78 ntBASIC19.09■□□□□ 0.65
MSR1P21757 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MSR1P21757 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms