Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CAPN3P20807 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CAPN3P20807 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
CAPN3P20807 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.84■□□□□ 0.93
CAPN3P20807 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.84■□□□□ 0.93
CAPN3P20807 CA15P2-201ENST00000611168 834 ntBASIC20.84■□□□□ 0.93
CAPN3P20807 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.84■□□□□ 0.93
CAPN3P20807 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CAPN3P20807 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CAPN3P20807 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CAPN3P20807 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.84■□□□□ 0.93
CAPN3P20807 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
CAPN3P20807 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CAPN3P20807 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CAPN3P20807 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CAPN3P20807 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CAPN3P20807 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CAPN3P20807 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CAPN3P20807 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CAPN3P20807 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CAPN3P20807 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CAPN3P20807 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CAPN3P20807 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CAPN3P20807 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CAPN3P20807 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CAPN3P20807 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.82■□□□□ 0.92
CAPN3P20807 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.82■□□□□ 0.92
CAPN3P20807 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.82■□□□□ 0.92
CAPN3P20807 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CAPN3P20807 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.82■□□□□ 0.92
CAPN3P20807 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CAPN3P20807 AC244015.2-201ENST00000616358 1861 ntBASIC20.81■□□□□ 0.92
CAPN3P20807 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CAPN3P20807 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CAPN3P20807 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CAPN3P20807 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CAPN3P20807 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.81■□□□□ 0.92
CAPN3P20807 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.81■□□□□ 0.92
CAPN3P20807 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CAPN3P20807 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CAPN3P20807 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.81■□□□□ 0.92
CAPN3P20807 AC110285.6-201ENST00000617652 491 ntBASIC20.81■□□□□ 0.92
CAPN3P20807 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CAPN3P20807 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.81■□□□□ 0.92
CAPN3P20807 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CAPN3P20807 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CAPN3P20807 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CAPN3P20807 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CAPN3P20807 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CAPN3P20807 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CAPN3P20807 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CAPN3P20807 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
CAPN3P20807 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CAPN3P20807 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
CAPN3P20807 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CAPN3P20807 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CAPN3P20807 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CAPN3P20807 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.8■□□□□ 0.92
CAPN3P20807 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.8■□□□□ 0.92
CAPN3P20807 AC092028.1-203ENST00000608262 953 ntBASIC20.8■□□□□ 0.92
CAPN3P20807 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.8■□□□□ 0.92
CAPN3P20807 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CAPN3P20807 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CAPN3P20807 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CAPN3P20807 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CAPN3P20807 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CAPN3P20807 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CAPN3P20807 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.79■□□□□ 0.92
CAPN3P20807 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.79■□□□□ 0.92
CAPN3P20807 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CAPN3P20807 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.79■□□□□ 0.92
CAPN3P20807 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.79■□□□□ 0.92
CAPN3P20807 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.79■□□□□ 0.92
CAPN3P20807 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CAPN3P20807 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.79■□□□□ 0.92
CAPN3P20807 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CAPN3P20807 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CAPN3P20807 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.79■□□□□ 0.92
CAPN3P20807 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.78■□□□□ 0.92
CAPN3P20807 AC009102.2-201ENST00000606772 1639 ntBASIC20.78■□□□□ 0.92
CAPN3P20807 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CAPN3P20807 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CAPN3P20807 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CAPN3P20807 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.78■□□□□ 0.92
CAPN3P20807 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.78■□□□□ 0.92
CAPN3P20807 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CAPN3P20807 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CAPN3P20807 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.78■□□□□ 0.92
CAPN3P20807 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CAPN3P20807 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CAPN3P20807 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.78■□□□□ 0.92
CAPN3P20807 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CAPN3P20807 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.78■□□□□ 0.92
CAPN3P20807 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CAPN3P20807 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.77■□□□□ 0.92
CAPN3P20807 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
CAPN3P20807 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.77■□□□□ 0.92
CAPN3P20807 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.77■□□□□ 0.92
CAPN3P20807 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
CAPN3P20807 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms