Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD53P19397 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CD53P19397 AC027682.1-201ENST00000562846 899 ntBASIC19.62■□□□□ 0.73
CD53P19397 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CD53P19397 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD53P19397 AL353803.4-201ENST00000565882 1934 ntBASIC19.62■□□□□ 0.73
CD53P19397 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD53P19397 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD53P19397 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD53P19397 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.61■□□□□ 0.73
CD53P19397 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CD53P19397 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CD53P19397 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CD53P19397 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.61■□□□□ 0.73
CD53P19397 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CD53P19397 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CD53P19397 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CD53P19397 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CD53P19397 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.61■□□□□ 0.73
CD53P19397 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CD53P19397 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.61■□□□□ 0.73
CD53P19397 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CD53P19397 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CD53P19397 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CD53P19397 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.61■□□□□ 0.73
CD53P19397 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CD53P19397 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CD53P19397 AL137060.1-201ENST00000618151 2648 ntBASIC19.6■□□□□ 0.73
CD53P19397 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.6■□□□□ 0.73
CD53P19397 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CD53P19397 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CD53P19397 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CD53P19397 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.6■□□□□ 0.73
CD53P19397 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CD53P19397 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CD53P19397 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CD53P19397 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CD53P19397 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CD53P19397 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CD53P19397 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CD53P19397 AC080038.3-201ENST00000623346 1952 ntBASIC19.59■□□□□ 0.73
CD53P19397 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CD53P19397 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CD53P19397 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CD53P19397 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CD53P19397 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.59■□□□□ 0.73
CD53P19397 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.59■□□□□ 0.73
CD53P19397 AC099791.2-201ENST00000605725 427 ntBASIC19.59■□□□□ 0.73
CD53P19397 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CD53P19397 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.59■□□□□ 0.73
CD53P19397 FBXW4P1-201ENST00000426721 2239 ntBASIC19.59■□□□□ 0.73
CD53P19397 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CD53P19397 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CD53P19397 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
CD53P19397 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CD53P19397 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.58■□□□□ 0.73
CD53P19397 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.58■□□□□ 0.73
CD53P19397 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CD53P19397 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CD53P19397 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CD53P19397 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CD53P19397 AL138724.1-201ENST00000606771 1088 ntBASIC19.58■□□□□ 0.72
CD53P19397 AC011298.3-201ENST00000615796 283 ntBASIC19.58■□□□□ 0.72
CD53P19397 AC087742.1-201ENST00000575880 1738 ntBASIC19.58■□□□□ 0.72
CD53P19397 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CD53P19397 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.58■□□□□ 0.72
CD53P19397 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CD53P19397 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CD53P19397 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CD53P19397 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
CD53P19397 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CD53P19397 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CD53P19397 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CD53P19397 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CD53P19397 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CD53P19397 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.57■□□□□ 0.72
CD53P19397 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.57■□□□□ 0.72
CD53P19397 IRS3P-201ENST00000223076 1006 ntBASIC19.57■□□□□ 0.72
CD53P19397 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CD53P19397 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CD53P19397 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.57■□□□□ 0.72
CD53P19397 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.57■□□□□ 0.72
CD53P19397 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.57■□□□□ 0.72
CD53P19397 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.57■□□□□ 0.72
CD53P19397 AC008764.7-201ENST00000593779 1081 ntBASIC19.57■□□□□ 0.72
CD53P19397 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.57■□□□□ 0.72
CD53P19397 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.57■□□□□ 0.72
CD53P19397 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CD53P19397 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.57■□□□□ 0.72
CD53P19397 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CD53P19397 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.56■□□□□ 0.72
CD53P19397 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CD53P19397 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CD53P19397 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CD53P19397 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.56■□□□□ 0.72
CD53P19397 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.56■□□□□ 0.72
CD53P19397 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.56■□□□□ 0.72
CD53P19397 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.56■□□□□ 0.72
CD53P19397 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
CD53P19397 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms