Protein–RNA interactions for Protein: P12694

BCKDHA, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHAP12694 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
BCKDHAP12694 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
BCKDHAP12694 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
BCKDHAP12694 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BCKDHAP12694 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.71■□□□□ 0.91
BCKDHAP12694 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.71■□□□□ 0.91
BCKDHAP12694 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.71■□□□□ 0.91
BCKDHAP12694 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BCKDHAP12694 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
BCKDHAP12694 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BCKDHAP12694 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
BCKDHAP12694 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
BCKDHAP12694 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.7■□□□□ 0.9
BCKDHAP12694 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
BCKDHAP12694 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
BCKDHAP12694 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.7■□□□□ 0.9
BCKDHAP12694 MIR3181-201ENST00000578512 73 ntBASIC20.7■□□□□ 0.9
BCKDHAP12694 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BCKDHAP12694 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BCKDHAP12694 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
BCKDHAP12694 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.7■□□□□ 0.9
BCKDHAP12694 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
BCKDHAP12694 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
BCKDHAP12694 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BCKDHAP12694 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BCKDHAP12694 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BCKDHAP12694 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
BCKDHAP12694 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.69■□□□□ 0.9
BCKDHAP12694 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BCKDHAP12694 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
BCKDHAP12694 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.69■□□□□ 0.9
BCKDHAP12694 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.69■□□□□ 0.9
BCKDHAP12694 AC079089.2-201ENST00000531211 1277 ntBASIC20.69■□□□□ 0.9
BCKDHAP12694 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
BCKDHAP12694 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BCKDHAP12694 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BCKDHAP12694 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BCKDHAP12694 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BCKDHAP12694 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BCKDHAP12694 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BCKDHAP12694 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.69■□□□□ 0.9
BCKDHAP12694 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BCKDHAP12694 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.68■□□□□ 0.9
BCKDHAP12694 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BCKDHAP12694 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.68■□□□□ 0.9
BCKDHAP12694 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BCKDHAP12694 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BCKDHAP12694 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
BCKDHAP12694 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.68■□□□□ 0.9
BCKDHAP12694 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.68■□□□□ 0.9
BCKDHAP12694 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BCKDHAP12694 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.68■□□□□ 0.9
BCKDHAP12694 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
BCKDHAP12694 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
BCKDHAP12694 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
BCKDHAP12694 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.68■□□□□ 0.9
BCKDHAP12694 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
BCKDHAP12694 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.68■□□□□ 0.9
BCKDHAP12694 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
BCKDHAP12694 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BCKDHAP12694 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
BCKDHAP12694 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
BCKDHAP12694 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BCKDHAP12694 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BCKDHAP12694 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BCKDHAP12694 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.67■□□□□ 0.9
BCKDHAP12694 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
BCKDHAP12694 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.67■□□□□ 0.9
BCKDHAP12694 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.67■□□□□ 0.9
BCKDHAP12694 AL512631.2-201ENST00000604634 923 ntBASIC20.67■□□□□ 0.9
BCKDHAP12694 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.67■□□□□ 0.9
BCKDHAP12694 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.67■□□□□ 0.9
BCKDHAP12694 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BCKDHAP12694 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BCKDHAP12694 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
BCKDHAP12694 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.67■□□□□ 0.9
BCKDHAP12694 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.66■□□□□ 0.9
BCKDHAP12694 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BCKDHAP12694 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BCKDHAP12694 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BCKDHAP12694 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
BCKDHAP12694 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
BCKDHAP12694 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BCKDHAP12694 SRD5A1P1-201ENST00000442297 786 ntBASIC20.66■□□□□ 0.9
BCKDHAP12694 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
BCKDHAP12694 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BCKDHAP12694 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BCKDHAP12694 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
BCKDHAP12694 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
BCKDHAP12694 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.66■□□□□ 0.9
BCKDHAP12694 AC244015.2-201ENST00000616358 1861 ntBASIC20.66■□□□□ 0.9
BCKDHAP12694 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.66■□□□□ 0.9
BCKDHAP12694 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BCKDHAP12694 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.66■□□□□ 0.9
BCKDHAP12694 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
BCKDHAP12694 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BCKDHAP12694 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BCKDHAP12694 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
BCKDHAP12694 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BCKDHAP12694 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms