Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.65■■□□□ 1.06
THRAP10827 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
THRAP10827 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
THRAP10827 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
THRAP10827 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.65■■□□□ 1.06
THRAP10827 BX842568.3-201ENST00000418104 571 ntBASIC21.65■■□□□ 1.06
THRAP10827 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
THRAP10827 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.65■■□□□ 1.06
THRAP10827 AC233992.3-201ENST00000607491 485 ntBASIC21.65■■□□□ 1.06
THRAP10827 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
THRAP10827 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.65■■□□□ 1.06
THRAP10827 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
THRAP10827 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.64■■□□□ 1.06
THRAP10827 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
THRAP10827 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
THRAP10827 pRNA.6-201ENST00000610482 90 ntBASIC21.64■■□□□ 1.05
THRAP10827 pRNA.5-201ENST00000612139 90 ntBASIC21.64■■□□□ 1.05
THRAP10827 pRNA.11-201ENST00000618423 90 ntBASIC21.64■■□□□ 1.05
THRAP10827 pRNA.13-201ENST00000619112 90 ntBASIC21.64■■□□□ 1.05
THRAP10827 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
THRAP10827 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
THRAP10827 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
THRAP10827 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
THRAP10827 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
THRAP10827 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
THRAP10827 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
THRAP10827 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
THRAP10827 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
THRAP10827 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
THRAP10827 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
THRAP10827 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
THRAP10827 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.63■■□□□ 1.05
THRAP10827 MIR6821-201ENST00000617625 74 ntBASIC21.63■■□□□ 1.05
THRAP10827 AC092053.2-201ENST00000640557 1818 ntBASIC21.63■■□□□ 1.05
THRAP10827 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.63■■□□□ 1.05
THRAP10827 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
THRAP10827 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
THRAP10827 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
THRAP10827 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.63■■□□□ 1.05
THRAP10827 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
THRAP10827 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
THRAP10827 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
THRAP10827 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
THRAP10827 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
THRAP10827 IRS3P-201ENST00000223076 1006 ntBASIC21.62■■□□□ 1.05
THRAP10827 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.62■■□□□ 1.05
THRAP10827 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.62■■□□□ 1.05
THRAP10827 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.62■■□□□ 1.05
THRAP10827 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.62■■□□□ 1.05
THRAP10827 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
THRAP10827 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
THRAP10827 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
THRAP10827 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
THRAP10827 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
THRAP10827 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.62■■□□□ 1.05
THRAP10827 C11orf96-202ENST00000528572 1834 ntBASIC21.62■■□□□ 1.05
THRAP10827 AL137060.1-201ENST00000618151 2648 ntBASIC21.61■■□□□ 1.05
THRAP10827 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
THRAP10827 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
THRAP10827 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
THRAP10827 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.61■■□□□ 1.05
THRAP10827 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
THRAP10827 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
THRAP10827 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.61■■□□□ 1.05
THRAP10827 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.61■■□□□ 1.05
THRAP10827 AC097381.1-201ENST00000429019 1296 ntBASIC21.61■■□□□ 1.05
THRAP10827 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
THRAP10827 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.61■■□□□ 1.05
THRAP10827 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
THRAP10827 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.61■■□□□ 1.05
THRAP10827 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
THRAP10827 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.61■■□□□ 1.05
THRAP10827 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.61■■□□□ 1.05
THRAP10827 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
THRAP10827 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
THRAP10827 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
THRAP10827 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
THRAP10827 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
THRAP10827 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
THRAP10827 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
THRAP10827 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
THRAP10827 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.6■■□□□ 1.05
THRAP10827 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
THRAP10827 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.6■■□□□ 1.05
THRAP10827 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.6■■□□□ 1.05
THRAP10827 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
THRAP10827 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
THRAP10827 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
THRAP10827 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
THRAP10827 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
THRAP10827 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
THRAP10827 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.6■■□□□ 1.05
THRAP10827 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
THRAP10827 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
THRAP10827 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.59■■□□□ 1.05
THRAP10827 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
THRAP10827 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
THRAP10827 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
THRAP10827 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
THRAP10827 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms