Protein–RNA interactions for Protein: P0DKX4

SMIM18, Small integral membrane protein 18, humanhuman

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM18P0DKX4 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMIM18P0DKX4 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMIM18P0DKX4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMIM18P0DKX4 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.87■□□□□ 0.77
SMIM18P0DKX4 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SMIM18P0DKX4 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMIM18P0DKX4 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMIM18P0DKX4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.86■□□□□ 0.77
SMIM18P0DKX4 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMIM18P0DKX4 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMIM18P0DKX4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.86■□□□□ 0.77
SMIM18P0DKX4 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC19.86■□□□□ 0.77
SMIM18P0DKX4 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SMIM18P0DKX4 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMIM18P0DKX4 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMIM18P0DKX4 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.86■□□□□ 0.77
SMIM18P0DKX4 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMIM18P0DKX4 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SMIM18P0DKX4 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.85■□□□□ 0.77
SMIM18P0DKX4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMIM18P0DKX4 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
SMIM18P0DKX4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.85■□□□□ 0.77
SMIM18P0DKX4 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMIM18P0DKX4 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMIM18P0DKX4 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.85■□□□□ 0.77
SMIM18P0DKX4 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.85■□□□□ 0.77
SMIM18P0DKX4 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
SMIM18P0DKX4 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.85■□□□□ 0.77
SMIM18P0DKX4 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
SMIM18P0DKX4 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMIM18P0DKX4 PCDHAC2-203ENST00000615316 3011 ntBASIC19.85■□□□□ 0.77
SMIM18P0DKX4 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
SMIM18P0DKX4 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.85■□□□□ 0.77
SMIM18P0DKX4 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.85■□□□□ 0.77
SMIM18P0DKX4 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
SMIM18P0DKX4 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SMIM18P0DKX4 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SMIM18P0DKX4 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMIM18P0DKX4 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SMIM18P0DKX4 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMIM18P0DKX4 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SMIM18P0DKX4 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
SMIM18P0DKX4 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMIM18P0DKX4 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.84■□□□□ 0.77
SMIM18P0DKX4 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMIM18P0DKX4 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.84■□□□□ 0.77
SMIM18P0DKX4 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
SMIM18P0DKX4 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SMIM18P0DKX4 AP005212.1-201ENST00000581547 1997 ntBASIC19.84■□□□□ 0.77
SMIM18P0DKX4 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
SMIM18P0DKX4 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SMIM18P0DKX4 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SMIM18P0DKX4 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SMIM18P0DKX4 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SMIM18P0DKX4 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SMIM18P0DKX4 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.77
SMIM18P0DKX4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.83■□□□□ 0.77
SMIM18P0DKX4 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.83■□□□□ 0.77
SMIM18P0DKX4 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SMIM18P0DKX4 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SMIM18P0DKX4 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
SMIM18P0DKX4 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
SMIM18P0DKX4 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SMIM18P0DKX4 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SMIM18P0DKX4 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SMIM18P0DKX4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SMIM18P0DKX4 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SMIM18P0DKX4 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SMIM18P0DKX4 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
SMIM18P0DKX4 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.83■□□□□ 0.76
SMIM18P0DKX4 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SMIM18P0DKX4 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMIM18P0DKX4 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMIM18P0DKX4 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
SMIM18P0DKX4 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMIM18P0DKX4 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SMIM18P0DKX4 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.82■□□□□ 0.76
SMIM18P0DKX4 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMIM18P0DKX4 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
SMIM18P0DKX4 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMIM18P0DKX4 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.82■□□□□ 0.76
SMIM18P0DKX4 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.82■□□□□ 0.76
SMIM18P0DKX4 LINC01960-201ENST00000563759 1884 ntBASIC19.82■□□□□ 0.76
SMIM18P0DKX4 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
SMIM18P0DKX4 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMIM18P0DKX4 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.81■□□□□ 0.76
SMIM18P0DKX4 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.81■□□□□ 0.76
SMIM18P0DKX4 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMIM18P0DKX4 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMIM18P0DKX4 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.81■□□□□ 0.76
SMIM18P0DKX4 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SMIM18P0DKX4 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMIM18P0DKX4 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
SMIM18P0DKX4 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.81■□□□□ 0.76
SMIM18P0DKX4 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.8■□□□□ 0.76
SMIM18P0DKX4 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
SMIM18P0DKX4 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMIM18P0DKX4 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMIM18P0DKX4 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMIM18P0DKX4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms