Protein–RNA interactions for Protein: P0DKX0

ZNF728, Zinc finger protein 728, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF728P0DKX0 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.41■□□□□ 0.54
ZNF728P0DKX0 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
ZNF728P0DKX0 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF728P0DKX0 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF728P0DKX0 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.41■□□□□ 0.54
ZNF728P0DKX0 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.41■□□□□ 0.54
ZNF728P0DKX0 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.41■□□□□ 0.54
ZNF728P0DKX0 AC241377.3-202ENST00000626088 1088 ntBASIC18.41■□□□□ 0.54
ZNF728P0DKX0 AC241585.3-202ENST00000628937 1088 ntBASIC18.41■□□□□ 0.54
ZNF728P0DKX0 AC245100.8-202ENST00000629247 1058 ntBASIC18.41■□□□□ 0.54
ZNF728P0DKX0 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF728P0DKX0 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF728P0DKX0 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF728P0DKX0 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
ZNF728P0DKX0 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZNF728P0DKX0 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
ZNF728P0DKX0 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZNF728P0DKX0 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.4■□□□□ 0.54
ZNF728P0DKX0 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
ZNF728P0DKX0 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZNF728P0DKX0 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ZNF728P0DKX0 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
ZNF728P0DKX0 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.4■□□□□ 0.54
ZNF728P0DKX0 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.39■□□□□ 0.54
ZNF728P0DKX0 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZNF728P0DKX0 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZNF728P0DKX0 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
ZNF728P0DKX0 MIR4466-201ENST00000606121 54 ntBASIC18.39■□□□□ 0.53
ZNF728P0DKX0 AC087742.1-201ENST00000575880 1738 ntBASIC18.39■□□□□ 0.53
ZNF728P0DKX0 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZNF728P0DKX0 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZNF728P0DKX0 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZNF728P0DKX0 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZNF728P0DKX0 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
ZNF728P0DKX0 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
ZNF728P0DKX0 AL024507.2-201ENST00000606070 2574 ntBASIC18.38■□□□□ 0.53
ZNF728P0DKX0 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.38■□□□□ 0.53
ZNF728P0DKX0 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.38■□□□□ 0.53
ZNF728P0DKX0 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF728P0DKX0 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF728P0DKX0 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF728P0DKX0 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF728P0DKX0 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF728P0DKX0 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF728P0DKX0 DUX4L4-201ENST00000566884 1269 ntBASIC18.38■□□□□ 0.53
ZNF728P0DKX0 AC092171.4-201ENST00000609130 632 ntBASIC18.38■□□□□ 0.53
ZNF728P0DKX0 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.38■□□□□ 0.53
ZNF728P0DKX0 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.38■□□□□ 0.53
ZNF728P0DKX0 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.38■□□□□ 0.53
ZNF728P0DKX0 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF728P0DKX0 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF728P0DKX0 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
ZNF728P0DKX0 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF728P0DKX0 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF728P0DKX0 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF728P0DKX0 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF728P0DKX0 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF728P0DKX0 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.37■□□□□ 0.53
ZNF728P0DKX0 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.37■□□□□ 0.53
ZNF728P0DKX0 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF728P0DKX0 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
ZNF728P0DKX0 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.37■□□□□ 0.53
ZNF728P0DKX0 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF728P0DKX0 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF728P0DKX0 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.36■□□□□ 0.53
ZNF728P0DKX0 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.36■□□□□ 0.53
ZNF728P0DKX0 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF728P0DKX0 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.36■□□□□ 0.53
ZNF728P0DKX0 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF728P0DKX0 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.36■□□□□ 0.53
ZNF728P0DKX0 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
ZNF728P0DKX0 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF728P0DKX0 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.36■□□□□ 0.53
ZNF728P0DKX0 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
ZNF728P0DKX0 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF728P0DKX0 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF728P0DKX0 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
ZNF728P0DKX0 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF728P0DKX0 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF728P0DKX0 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF728P0DKX0 AC008406.3-201ENST00000620001 1374 ntBASIC18.35■□□□□ 0.53
ZNF728P0DKX0 AL136116.3-201ENST00000402907 1138 ntBASIC18.35■□□□□ 0.53
ZNF728P0DKX0 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF728P0DKX0 AC099791.2-201ENST00000605725 427 ntBASIC18.35■□□□□ 0.53
ZNF728P0DKX0 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.35■□□□□ 0.53
ZNF728P0DKX0 AC009086.3-201ENST00000623486 1008 ntBASIC18.35■□□□□ 0.53
ZNF728P0DKX0 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF728P0DKX0 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF728P0DKX0 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF728P0DKX0 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF728P0DKX0 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF728P0DKX0 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.34■□□□□ 0.53
ZNF728P0DKX0 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.34■□□□□ 0.53
ZNF728P0DKX0 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.34■□□□□ 0.53
ZNF728P0DKX0 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.34■□□□□ 0.53
ZNF728P0DKX0 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
ZNF728P0DKX0 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.34■□□□□ 0.53
ZNF728P0DKX0 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
ZNF728P0DKX0 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF728P0DKX0 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms