Protein–RNA interactions for Protein: P08F94

PKHD1, Fibrocystin, humanhuman

Predictions only

Length 4,074 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1P08F94 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
PKHD1P08F94 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC14.12□□□□□ -0.15
PKHD1P08F94 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC14.12□□□□□ -0.15
PKHD1P08F94 DUSP8P4-201ENST00000399538 1761 ntBASIC14.12□□□□□ -0.15
PKHD1P08F94 AC004687.1-201ENST00000579003 1625 ntBASIC14.12□□□□□ -0.15
PKHD1P08F94 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PKHD1P08F94 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
PKHD1P08F94 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC14.11□□□□□ -0.15
PKHD1P08F94 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC14.11□□□□□ -0.15
PKHD1P08F94 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC14.11□□□□□ -0.15
PKHD1P08F94 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PKHD1P08F94 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PKHD1P08F94 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC14.11□□□□□ -0.15
PKHD1P08F94 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PKHD1P08F94 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC14.11□□□□□ -0.15
PKHD1P08F94 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PKHD1P08F94 AC022211.4-201ENST00000625094 2161 ntBASIC14.11□□□□□ -0.15
PKHD1P08F94 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
PKHD1P08F94 MIR4758-201ENST00000577688 71 ntBASIC14.11□□□□□ -0.15
PKHD1P08F94 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC14.11□□□□□ -0.15
PKHD1P08F94 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PKHD1P08F94 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC14.11□□□□□ -0.15
PKHD1P08F94 PHB2-213ENST00000546111 858 ntTSL 2 BASIC14.1□□□□□ -0.15
PKHD1P08F94 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
PKHD1P08F94 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
PKHD1P08F94 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC14.1□□□□□ -0.15
PKHD1P08F94 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC14.1□□□□□ -0.15
PKHD1P08F94 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PKHD1P08F94 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
PKHD1P08F94 BAALC-201ENST00000297574 801 ntTSL 3 BASIC14.1□□□□□ -0.15
PKHD1P08F94 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC14.1□□□□□ -0.15
PKHD1P08F94 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC14.1□□□□□ -0.15
PKHD1P08F94 AC010536.3-201ENST00000620306 533 ntBASIC14.1□□□□□ -0.15
PKHD1P08F94 MYCNOS-205ENST00000641950 531 ntBASIC14.1□□□□□ -0.15
PKHD1P08F94 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC14.1□□□□□ -0.15
PKHD1P08F94 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
PKHD1P08F94 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
PKHD1P08F94 PEX7-202ENST00000367756 680 ntTSL 3 BASIC14.1□□□□□ -0.15
PKHD1P08F94 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC14.1□□□□□ -0.15
PKHD1P08F94 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC14.1□□□□□ -0.15
PKHD1P08F94 AC073912.3-201ENST00000624414 853 ntBASIC14.1□□□□□ -0.15
PKHD1P08F94 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
PKHD1P08F94 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC14.1□□□□□ -0.15
PKHD1P08F94 MME-217ENST00000616757 1315 ntTSL 5 BASIC14.1□□□□□ -0.15
PKHD1P08F94 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
PKHD1P08F94 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PKHD1P08F94 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
PKHD1P08F94 IRX5-204ENST00000560154 879 ntTSL 5 BASIC14.1□□□□□ -0.15
PKHD1P08F94 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC14.1□□□□□ -0.15
PKHD1P08F94 AL445228.2-201ENST00000605589 952 ntBASIC14.1□□□□□ -0.15
PKHD1P08F94 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PKHD1P08F94 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PKHD1P08F94 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
PKHD1P08F94 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
PKHD1P08F94 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC14.09□□□□□ -0.15
PKHD1P08F94 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PKHD1P08F94 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
PKHD1P08F94 AC068338.2-201ENST00000563278 1430 ntBASIC14.09□□□□□ -0.15
PKHD1P08F94 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
PKHD1P08F94 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC14.09□□□□□ -0.15
PKHD1P08F94 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC14.09□□□□□ -0.15
PKHD1P08F94 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PKHD1P08F94 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PKHD1P08F94 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PKHD1P08F94 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PKHD1P08F94 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC14.09□□□□□ -0.15
PKHD1P08F94 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
PKHD1P08F94 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
PKHD1P08F94 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
PKHD1P08F94 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
PKHD1P08F94 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC14.08□□□□□ -0.16
PKHD1P08F94 GXYLT1P3-201ENST00000453058 1193 ntBASIC14.08□□□□□ -0.16
PKHD1P08F94 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC14.08□□□□□ -0.16
PKHD1P08F94 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC14.08□□□□□ -0.16
PKHD1P08F94 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PKHD1P08F94 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC14.08□□□□□ -0.16
PKHD1P08F94 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
PKHD1P08F94 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
PKHD1P08F94 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PKHD1P08F94 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC14.08□□□□□ -0.16
PKHD1P08F94 ESRRAP1-201ENST00000400596 1257 ntBASIC14.08□□□□□ -0.16
PKHD1P08F94 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
PKHD1P08F94 AC093787.1-201ENST00000450396 207 ntBASIC14.08□□□□□ -0.16
PKHD1P08F94 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
PKHD1P08F94 LINC01529-204ENST00000636474 1715 ntBASIC14.08□□□□□ -0.16
PKHD1P08F94 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PKHD1P08F94 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
PKHD1P08F94 AC026366.1-201ENST00000488803 879 ntBASIC14.08□□□□□ -0.16
PKHD1P08F94 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC14.08□□□□□ -0.16
PKHD1P08F94 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PKHD1P08F94 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PKHD1P08F94 PLLP-204ENST00000569059 665 ntTSL 3 BASIC14.07□□□□□ -0.16
PKHD1P08F94 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC14.07□□□□□ -0.16
PKHD1P08F94 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PKHD1P08F94 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PKHD1P08F94 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC14.07□□□□□ -0.16
PKHD1P08F94 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC14.07□□□□□ -0.16
PKHD1P08F94 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC14.07□□□□□ -0.16
PKHD1P08F94 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC14.07□□□□□ -0.16
PKHD1P08F94 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 9.1 ms