Protein–RNA interactions for Protein: P04049

RAF1, RAF proto-oncogene serine/threonine-protein kinase, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1P04049 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.53■□□□□ 0.72
RAF1P04049 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.53■□□□□ 0.72
RAF1P04049 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.53■□□□□ 0.72
RAF1P04049 AC090192.1-201ENST00000517740 490 ntBASIC19.53■□□□□ 0.72
RAF1P04049 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.53■□□□□ 0.72
RAF1P04049 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.53■□□□□ 0.72
RAF1P04049 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RAF1P04049 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.53■□□□□ 0.72
RAF1P04049 RARRES2P11-201ENST00000635158 484 ntBASIC19.53■□□□□ 0.72
RAF1P04049 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RAF1P04049 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAF1P04049 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.53■□□□□ 0.72
RAF1P04049 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
RAF1P04049 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.53■□□□□ 0.72
RAF1P04049 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
RAF1P04049 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAF1P04049 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAF1P04049 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.52■□□□□ 0.72
RAF1P04049 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RAF1P04049 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RAF1P04049 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RAF1P04049 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RAF1P04049 AC034268.1-201ENST00000441047 882 ntBASIC19.52■□□□□ 0.72
RAF1P04049 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.52■□□□□ 0.72
RAF1P04049 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
RAF1P04049 AC233992.3-201ENST00000607491 485 ntBASIC19.52■□□□□ 0.72
RAF1P04049 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.52■□□□□ 0.72
RAF1P04049 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAF1P04049 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RAF1P04049 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RAF1P04049 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
RAF1P04049 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.52■□□□□ 0.71
RAF1P04049 AL137060.1-201ENST00000618151 2648 ntBASIC19.52■□□□□ 0.71
RAF1P04049 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAF1P04049 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAF1P04049 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.51■□□□□ 0.71
RAF1P04049 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.51■□□□□ 0.71
RAF1P04049 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAF1P04049 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RAF1P04049 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RAF1P04049 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.51■□□□□ 0.71
RAF1P04049 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAF1P04049 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAF1P04049 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RAF1P04049 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
RAF1P04049 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RAF1P04049 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
RAF1P04049 AC009102.2-201ENST00000606772 1639 ntBASIC19.51■□□□□ 0.71
RAF1P04049 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.5■□□□□ 0.71
RAF1P04049 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.5■□□□□ 0.71
RAF1P04049 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAF1P04049 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RAF1P04049 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RAF1P04049 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.5■□□□□ 0.71
RAF1P04049 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.5■□□□□ 0.71
RAF1P04049 AL137784.2-201ENST00000607332 1000 ntBASIC19.5■□□□□ 0.71
RAF1P04049 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RAF1P04049 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.5■□□□□ 0.71
RAF1P04049 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RAF1P04049 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
RAF1P04049 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RAF1P04049 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.5■□□□□ 0.71
RAF1P04049 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAF1P04049 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAF1P04049 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RAF1P04049 BX842568.3-201ENST00000418104 571 ntBASIC19.49■□□□□ 0.71
RAF1P04049 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.49■□□□□ 0.71
RAF1P04049 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RAF1P04049 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RAF1P04049 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RAF1P04049 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.49■□□□□ 0.71
RAF1P04049 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
RAF1P04049 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAF1P04049 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAF1P04049 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
RAF1P04049 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAF1P04049 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.48■□□□□ 0.71
RAF1P04049 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
RAF1P04049 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.48■□□□□ 0.71
RAF1P04049 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.48■□□□□ 0.71
RAF1P04049 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAF1P04049 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.48■□□□□ 0.71
RAF1P04049 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAF1P04049 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RAF1P04049 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAF1P04049 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAF1P04049 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
RAF1P04049 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.47■□□□□ 0.71
RAF1P04049 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RAF1P04049 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.47■□□□□ 0.71
RAF1P04049 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAF1P04049 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
RAF1P04049 AC092053.2-201ENST00000640557 1818 ntBASIC19.47■□□□□ 0.71
RAF1P04049 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAF1P04049 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.47■□□□□ 0.71
RAF1P04049 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAF1P04049 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAF1P04049 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAF1P04049 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RAF1P04049 C17orf82-201ENST00000623772 1530 ntBASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms