Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IFNA1P01562 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IFNA1P01562 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
IFNA1P01562 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IFNA1P01562 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
IFNA1P01562 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.15■□□□□ 0.34
IFNA1P01562 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
IFNA1P01562 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IFNA1P01562 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
IFNA1P01562 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IFNA1P01562 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
IFNA1P01562 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
IFNA1P01562 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
IFNA1P01562 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
IFNA1P01562 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IFNA1P01562 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC17.14■□□□□ 0.33
IFNA1P01562 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC17.14■□□□□ 0.33
IFNA1P01562 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
IFNA1P01562 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
IFNA1P01562 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IFNA1P01562 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.14■□□□□ 0.33
IFNA1P01562 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.14■□□□□ 0.33
IFNA1P01562 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IFNA1P01562 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IFNA1P01562 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IFNA1P01562 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
IFNA1P01562 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IFNA1P01562 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
IFNA1P01562 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC17.13■□□□□ 0.33
IFNA1P01562 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IFNA1P01562 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IFNA1P01562 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
IFNA1P01562 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IFNA1P01562 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
IFNA1P01562 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
IFNA1P01562 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
IFNA1P01562 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
IFNA1P01562 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
IFNA1P01562 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IFNA1P01562 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IFNA1P01562 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
IFNA1P01562 AL157384.1-201ENST00000445995 2473 ntBASIC17.12■□□□□ 0.33
IFNA1P01562 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IFNA1P01562 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IFNA1P01562 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
IFNA1P01562 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IFNA1P01562 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.12■□□□□ 0.33
IFNA1P01562 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
IFNA1P01562 AL592295.1-201ENST00000400984 884 ntBASIC17.12■□□□□ 0.33
IFNA1P01562 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC17.12■□□□□ 0.33
IFNA1P01562 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
IFNA1P01562 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
IFNA1P01562 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IFNA1P01562 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
IFNA1P01562 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
IFNA1P01562 GOLGA2P6-201ENST00000340929 2049 ntBASIC17.11■□□□□ 0.33
IFNA1P01562 RNF165-205ENST00000588679 2904 ntBASIC17.11■□□□□ 0.33
IFNA1P01562 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IFNA1P01562 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
IFNA1P01562 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IFNA1P01562 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IFNA1P01562 AC060814.1-201ENST00000554326 538 ntBASIC17.11■□□□□ 0.33
IFNA1P01562 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC17.11■□□□□ 0.33
IFNA1P01562 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IFNA1P01562 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
IFNA1P01562 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
IFNA1P01562 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
IFNA1P01562 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
IFNA1P01562 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC17.11■□□□□ 0.33
IFNA1P01562 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IFNA1P01562 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
IFNA1P01562 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IFNA1P01562 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC17.1■□□□□ 0.33
IFNA1P01562 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IFNA1P01562 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IFNA1P01562 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.1■□□□□ 0.33
IFNA1P01562 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IFNA1P01562 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
IFNA1P01562 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
IFNA1P01562 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IFNA1P01562 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.1■□□□□ 0.33
IFNA1P01562 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
IFNA1P01562 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IFNA1P01562 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.1■□□□□ 0.33
IFNA1P01562 AC131274.2-201ENST00000580697 1507 ntBASIC17.1■□□□□ 0.33
IFNA1P01562 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IFNA1P01562 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
IFNA1P01562 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
IFNA1P01562 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.1■□□□□ 0.33
IFNA1P01562 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IFNA1P01562 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
IFNA1P01562 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.1■□□□□ 0.33
IFNA1P01562 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IFNA1P01562 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
IFNA1P01562 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IFNA1P01562 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IFNA1P01562 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
IFNA1P01562 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IFNA1P01562 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
IFNA1P01562 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms