Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LTAP01374 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LTAP01374 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LTAP01374 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LTAP01374 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LTAP01374 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LTAP01374 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
LTAP01374 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LTAP01374 ASB1-202ENST00000409297 878 ntTSL 5 BASIC16.32■□□□□ 0.2
LTAP01374 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC16.32■□□□□ 0.2
LTAP01374 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
LTAP01374 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC16.32■□□□□ 0.2
LTAP01374 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LTAP01374 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
LTAP01374 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LTAP01374 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LTAP01374 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LTAP01374 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LTAP01374 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LTAP01374 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LTAP01374 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LTAP01374 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC16.31■□□□□ 0.2
LTAP01374 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LTAP01374 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LTAP01374 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LTAP01374 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LTAP01374 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LTAP01374 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC16.31■□□□□ 0.2
LTAP01374 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC16.31■□□□□ 0.2
LTAP01374 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LTAP01374 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LTAP01374 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
LTAP01374 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LTAP01374 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LTAP01374 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC16.3■□□□□ 0.2
LTAP01374 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LTAP01374 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
LTAP01374 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LTAP01374 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LTAP01374 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC16.3■□□□□ 0.2
LTAP01374 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC16.3■□□□□ 0.2
LTAP01374 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LTAP01374 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LTAP01374 AC004687.1-201ENST00000579003 1625 ntBASIC16.3■□□□□ 0.2
LTAP01374 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
LTAP01374 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
LTAP01374 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LTAP01374 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LTAP01374 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
LTAP01374 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LTAP01374 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LTAP01374 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LTAP01374 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
LTAP01374 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC16.29■□□□□ 0.2
LTAP01374 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LTAP01374 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
LTAP01374 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LTAP01374 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LTAP01374 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC16.29■□□□□ 0.2
LTAP01374 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC16.29■□□□□ 0.2
LTAP01374 AC092667.1-201ENST00000434301 2586 ntBASIC16.29■□□□□ 0.2
LTAP01374 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LTAP01374 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LTAP01374 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LTAP01374 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC16.28■□□□□ 0.2
LTAP01374 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LTAP01374 RARRES2P2-201ENST00000394842 485 ntBASIC16.28■□□□□ 0.2
LTAP01374 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC16.28■□□□□ 0.2
LTAP01374 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC16.28■□□□□ 0.2
LTAP01374 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LTAP01374 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LTAP01374 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
LTAP01374 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LTAP01374 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LTAP01374 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
LTAP01374 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LTAP01374 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LTAP01374 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LTAP01374 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LTAP01374 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LTAP01374 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC16.27■□□□□ 0.2
LTAP01374 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LTAP01374 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LTAP01374 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC16.27■□□□□ 0.2
LTAP01374 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LTAP01374 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LTAP01374 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LTAP01374 AC005703.6-201ENST00000623265 1329 ntBASIC16.27■□□□□ 0.2
LTAP01374 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
LTAP01374 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC16.27■□□□□ 0.2
LTAP01374 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LTAP01374 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC16.27■□□□□ 0.2
LTAP01374 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LTAP01374 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LTAP01374 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC16.27■□□□□ 0.2
LTAP01374 DUX4L18-201ENST00000553347 1267 ntBASIC16.27■□□□□ 0.2
LTAP01374 MBP-237ENST00000579129 1052 ntTSL 5 BASIC16.27■□□□□ 0.2
LTAP01374 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC16.27■□□□□ 0.2
LTAP01374 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC16.27■□□□□ 0.2
LTAP01374 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms