Protein–RNA interactions for Protein: P00441

SOD1, Superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1P00441 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
SOD1P00441 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SOD1P00441 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
SOD1P00441 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.47■■□□□ 1.03
SOD1P00441 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
SOD1P00441 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SOD1P00441 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
SOD1P00441 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SOD1P00441 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SOD1P00441 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SOD1P00441 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SOD1P00441 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SOD1P00441 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.46■■□□□ 1.03
SOD1P00441 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
SOD1P00441 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
SOD1P00441 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.46■■□□□ 1.03
SOD1P00441 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.46■■□□□ 1.03
SOD1P00441 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.46■■□□□ 1.03
SOD1P00441 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SOD1P00441 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SOD1P00441 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
SOD1P00441 LINC02228-203ENST00000641970 1355 ntBASIC21.46■■□□□ 1.03
SOD1P00441 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.46■■□□□ 1.03
SOD1P00441 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.46■■□□□ 1.03
SOD1P00441 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
SOD1P00441 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SOD1P00441 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
SOD1P00441 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.45■■□□□ 1.02
SOD1P00441 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
SOD1P00441 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
SOD1P00441 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SOD1P00441 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
SOD1P00441 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
SOD1P00441 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SOD1P00441 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SOD1P00441 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SOD1P00441 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SOD1P00441 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.44■■□□□ 1.02
SOD1P00441 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.44■■□□□ 1.02
SOD1P00441 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SOD1P00441 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SOD1P00441 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SOD1P00441 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SOD1P00441 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SOD1P00441 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
SOD1P00441 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SOD1P00441 AL162430.1-201ENST00000480705 870 ntBASIC21.44■■□□□ 1.02
SOD1P00441 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.44■■□□□ 1.02
SOD1P00441 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.44■■□□□ 1.02
SOD1P00441 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SOD1P00441 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SOD1P00441 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SOD1P00441 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.44■■□□□ 1.02
SOD1P00441 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
SOD1P00441 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
SOD1P00441 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.43■■□□□ 1.02
SOD1P00441 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SOD1P00441 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SOD1P00441 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SOD1P00441 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
SOD1P00441 AC034268.1-201ENST00000441047 882 ntBASIC21.43■■□□□ 1.02
SOD1P00441 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.43■■□□□ 1.02
SOD1P00441 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.43■■□□□ 1.02
SOD1P00441 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SOD1P00441 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SOD1P00441 AC139530.1-201ENST00000575312 1977 ntBASIC21.43■■□□□ 1.02
SOD1P00441 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SOD1P00441 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.43■■□□□ 1.02
SOD1P00441 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
SOD1P00441 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
SOD1P00441 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.42■■□□□ 1.02
SOD1P00441 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.42■■□□□ 1.02
SOD1P00441 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SOD1P00441 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.42■■□□□ 1.02
SOD1P00441 ESRRAP2-201ENST00000418437 1549 ntBASIC21.42■■□□□ 1.02
SOD1P00441 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SOD1P00441 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.42■■□□□ 1.02
SOD1P00441 KRT18P14-201ENST00000534205 1250 ntBASIC21.42■■□□□ 1.02
SOD1P00441 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.42■■□□□ 1.02
SOD1P00441 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SOD1P00441 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.41■■□□□ 1.02
SOD1P00441 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.41■■□□□ 1.02
SOD1P00441 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.41■■□□□ 1.02
SOD1P00441 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.41■■□□□ 1.02
SOD1P00441 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SOD1P00441 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.41■■□□□ 1.02
SOD1P00441 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
SOD1P00441 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.41■■□□□ 1.02
SOD1P00441 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.41■■□□□ 1.02
SOD1P00441 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SOD1P00441 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SOD1P00441 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.41■■□□□ 1.02
SOD1P00441 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.41■■□□□ 1.02
SOD1P00441 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SOD1P00441 AC127496.7-201ENST00000625110 1798 ntBASIC21.41■■□□□ 1.02
SOD1P00441 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SOD1P00441 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SOD1P00441 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SOD1P00441 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SOD1P00441 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms