Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC22.2■■□□□ 1.14
MT-CO1P00395 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
MT-CO1P00395 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC22.2■■□□□ 1.14
MT-CO1P00395 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC22.19■■□□□ 1.14
MT-CO1P00395 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC22.19■■□□□ 1.14
MT-CO1P00395 AC087239.1-201ENST00000622671 572 ntBASIC22.19■■□□□ 1.14
MT-CO1P00395 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
MT-CO1P00395 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC22.19■■□□□ 1.14
MT-CO1P00395 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.19■■□□□ 1.14
MT-CO1P00395 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
MT-CO1P00395 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
MT-CO1P00395 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.19■■□□□ 1.14
MT-CO1P00395 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
MT-CO1P00395 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
MT-CO1P00395 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
MT-CO1P00395 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22.18■■□□□ 1.14
MT-CO1P00395 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
MT-CO1P00395 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
MT-CO1P00395 OXCT2P1-201ENST00000447263 1535 ntBASIC22.18■■□□□ 1.14
MT-CO1P00395 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC22.18■■□□□ 1.14
MT-CO1P00395 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC22.18■■□□□ 1.14
MT-CO1P00395 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC22.18■■□□□ 1.14
MT-CO1P00395 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC22.18■■□□□ 1.14
MT-CO1P00395 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
MT-CO1P00395 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
MT-CO1P00395 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
MT-CO1P00395 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
MT-CO1P00395 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
MT-CO1P00395 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
MT-CO1P00395 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
MT-CO1P00395 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC22.17■■□□□ 1.14
MT-CO1P00395 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
MT-CO1P00395 AC027612.3-201ENST00000413684 1047 ntBASIC22.17■■□□□ 1.14
MT-CO1P00395 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
MT-CO1P00395 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC22.17■■□□□ 1.14
MT-CO1P00395 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC22.17■■□□□ 1.14
MT-CO1P00395 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
MT-CO1P00395 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC22.17■■□□□ 1.14
MT-CO1P00395 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC22.16■■□□□ 1.14
MT-CO1P00395 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
MT-CO1P00395 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
MT-CO1P00395 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
MT-CO1P00395 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
MT-CO1P00395 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.16■■□□□ 1.14
MT-CO1P00395 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
MT-CO1P00395 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
MT-CO1P00395 YBX1P1-201ENST00000445822 960 ntBASIC22.16■■□□□ 1.14
MT-CO1P00395 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC22.16■■□□□ 1.14
MT-CO1P00395 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC22.16■■□□□ 1.14
MT-CO1P00395 SMUG1P1-201ENST00000590640 811 ntBASIC22.16■■□□□ 1.14
MT-CO1P00395 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
MT-CO1P00395 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
MT-CO1P00395 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
MT-CO1P00395 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC22.16■■□□□ 1.14
MT-CO1P00395 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
MT-CO1P00395 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
MT-CO1P00395 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
MT-CO1P00395 AC087742.1-201ENST00000575880 1738 ntBASIC22.15■■□□□ 1.14
MT-CO1P00395 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC22.15■■□□□ 1.14
MT-CO1P00395 MIR5787-201ENST00000611784 55 ntBASIC22.15■■□□□ 1.14
MT-CO1P00395 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
MT-CO1P00395 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
MT-CO1P00395 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
MT-CO1P00395 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
MT-CO1P00395 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
MT-CO1P00395 MPST-204ENST00000404393 1329 ntTSL 5 BASIC22.14■■□□□ 1.14
MT-CO1P00395 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
MT-CO1P00395 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
MT-CO1P00395 NT5C3AP1-201ENST00000394500 1012 ntBASIC22.14■■□□□ 1.13
MT-CO1P00395 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
MT-CO1P00395 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
MT-CO1P00395 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
MT-CO1P00395 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC22.14■■□□□ 1.13
MT-CO1P00395 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.14■■□□□ 1.13
MT-CO1P00395 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
MT-CO1P00395 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
MT-CO1P00395 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
MT-CO1P00395 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
MT-CO1P00395 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC22.13■■□□□ 1.13
MT-CO1P00395 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
MT-CO1P00395 RAB43-208ENST00000615093 783 ntTSL 5 BASIC22.13■■□□□ 1.13
MT-CO1P00395 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC22.13■■□□□ 1.13
MT-CO1P00395 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
MT-CO1P00395 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC22.13■■□□□ 1.13
MT-CO1P00395 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
MT-CO1P00395 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
MT-CO1P00395 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
MT-CO1P00395 C1orf229-201ENST00000623686 2258 ntBASIC22.12■■□□□ 1.13
MT-CO1P00395 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
MT-CO1P00395 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
MT-CO1P00395 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC22.12■■□□□ 1.13
MT-CO1P00395 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC22.12■■□□□ 1.13
MT-CO1P00395 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
MT-CO1P00395 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
MT-CO1P00395 ANKRD20A6P-201ENST00000618763 204 ntBASIC22.12■■□□□ 1.13
MT-CO1P00395 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
MT-CO1P00395 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
MT-CO1P00395 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
MT-CO1P00395 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
MT-CO1P00395 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms