Protein–RNA interactions for Protein: O95167

NDUFA3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3, humanhuman

Predictions only

Length 84 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3O95167 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.33■□□□□ 0.36
NDUFA3O95167 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
NDUFA3O95167 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NDUFA3O95167 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NDUFA3O95167 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.32■□□□□ 0.36
NDUFA3O95167 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.32■□□□□ 0.36
NDUFA3O95167 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NDUFA3O95167 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NDUFA3O95167 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.32■□□□□ 0.36
NDUFA3O95167 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
NDUFA3O95167 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NDUFA3O95167 AL031432.3-201ENST00000607698 485 ntBASIC17.32■□□□□ 0.36
NDUFA3O95167 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NDUFA3O95167 AC092053.2-201ENST00000640557 1818 ntBASIC17.32■□□□□ 0.36
NDUFA3O95167 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NDUFA3O95167 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
NDUFA3O95167 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NDUFA3O95167 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NDUFA3O95167 AC079834.2-201ENST00000609776 1949 ntBASIC17.31■□□□□ 0.36
NDUFA3O95167 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NDUFA3O95167 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC17.31■□□□□ 0.36
NDUFA3O95167 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC17.31■□□□□ 0.36
NDUFA3O95167 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NDUFA3O95167 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NDUFA3O95167 MIR939-201ENST00000401314 82 ntBASIC17.31■□□□□ 0.36
NDUFA3O95167 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.31■□□□□ 0.36
NDUFA3O95167 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.31■□□□□ 0.36
NDUFA3O95167 RALB-208ENST00000631312 311 ntTSL 5 BASIC17.31■□□□□ 0.36
NDUFA3O95167 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NDUFA3O95167 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NDUFA3O95167 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NDUFA3O95167 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NDUFA3O95167 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NDUFA3O95167 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NDUFA3O95167 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NDUFA3O95167 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.3■□□□□ 0.36
NDUFA3O95167 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NDUFA3O95167 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
NDUFA3O95167 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
NDUFA3O95167 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NDUFA3O95167 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NDUFA3O95167 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
NDUFA3O95167 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NDUFA3O95167 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NDUFA3O95167 AC099791.1-201ENST00000416440 715 ntBASIC17.3■□□□□ 0.36
NDUFA3O95167 IGHV3-19-201ENST00000521488 291 ntBASIC17.3■□□□□ 0.36
NDUFA3O95167 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.3■□□□□ 0.36
NDUFA3O95167 AC126544.1-201ENST00000580842 1059 ntBASIC17.3■□□□□ 0.36
NDUFA3O95167 AC008764.7-201ENST00000593779 1081 ntBASIC17.3■□□□□ 0.36
NDUFA3O95167 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NDUFA3O95167 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
NDUFA3O95167 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NDUFA3O95167 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
NDUFA3O95167 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NDUFA3O95167 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NDUFA3O95167 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NDUFA3O95167 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
NDUFA3O95167 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NDUFA3O95167 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NDUFA3O95167 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
NDUFA3O95167 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.29■□□□□ 0.36
NDUFA3O95167 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NDUFA3O95167 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NDUFA3O95167 AC091305.1-201ENST00000479476 895 ntBASIC17.29■□□□□ 0.36
NDUFA3O95167 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.29■□□□□ 0.36
NDUFA3O95167 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NDUFA3O95167 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.29■□□□□ 0.36
NDUFA3O95167 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.29■□□□□ 0.36
NDUFA3O95167 AF213884.3-201ENST00000563833 479 ntBASIC17.29■□□□□ 0.36
NDUFA3O95167 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NDUFA3O95167 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NDUFA3O95167 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.29■□□□□ 0.36
NDUFA3O95167 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NDUFA3O95167 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC17.29■□□□□ 0.36
NDUFA3O95167 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NDUFA3O95167 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.28■□□□□ 0.36
NDUFA3O95167 RASA4CP-201ENST00000424092 1398 ntBASIC17.28■□□□□ 0.36
NDUFA3O95167 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
NDUFA3O95167 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NDUFA3O95167 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NDUFA3O95167 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NDUFA3O95167 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.28■□□□□ 0.36
NDUFA3O95167 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC17.28■□□□□ 0.36
NDUFA3O95167 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NDUFA3O95167 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NDUFA3O95167 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.28■□□□□ 0.36
NDUFA3O95167 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.28■□□□□ 0.36
NDUFA3O95167 SUDS3P1-201ENST00000505831 966 ntBASIC17.28■□□□□ 0.36
NDUFA3O95167 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC17.28■□□□□ 0.36
NDUFA3O95167 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.28■□□□□ 0.36
NDUFA3O95167 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NDUFA3O95167 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NDUFA3O95167 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NDUFA3O95167 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NDUFA3O95167 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NDUFA3O95167 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NDUFA3O95167 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NDUFA3O95167 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
NDUFA3O95167 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NDUFA3O95167 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms