Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RFPL1O75677 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
RFPL1O75677 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RFPL1O75677 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RFPL1O75677 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
RFPL1O75677 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RFPL1O75677 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
RFPL1O75677 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
RFPL1O75677 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RFPL1O75677 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
RFPL1O75677 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
RFPL1O75677 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RFPL1O75677 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RFPL1O75677 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RFPL1O75677 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RFPL1O75677 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RFPL1O75677 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RFPL1O75677 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.76■■□□□ 1.07
RFPL1O75677 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RFPL1O75677 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
RFPL1O75677 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RFPL1O75677 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.75■■□□□ 1.07
RFPL1O75677 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.75■■□□□ 1.07
RFPL1O75677 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.75■■□□□ 1.07
RFPL1O75677 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.75■■□□□ 1.07
RFPL1O75677 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RFPL1O75677 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RFPL1O75677 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.75■■□□□ 1.07
RFPL1O75677 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RFPL1O75677 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.75■■□□□ 1.07
RFPL1O75677 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RFPL1O75677 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RFPL1O75677 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RFPL1O75677 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RFPL1O75677 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RFPL1O75677 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RFPL1O75677 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RFPL1O75677 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RFPL1O75677 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RFPL1O75677 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RFPL1O75677 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
RFPL1O75677 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RFPL1O75677 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RFPL1O75677 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.74■■□□□ 1.07
RFPL1O75677 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RFPL1O75677 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RFPL1O75677 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RFPL1O75677 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RFPL1O75677 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RFPL1O75677 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RFPL1O75677 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
RFPL1O75677 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RFPL1O75677 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RFPL1O75677 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RFPL1O75677 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
RFPL1O75677 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
RFPL1O75677 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RFPL1O75677 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RFPL1O75677 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RFPL1O75677 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
RFPL1O75677 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.72■■□□□ 1.07
RFPL1O75677 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RFPL1O75677 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RFPL1O75677 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.72■■□□□ 1.07
RFPL1O75677 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RFPL1O75677 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RFPL1O75677 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.72■■□□□ 1.07
RFPL1O75677 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.72■■□□□ 1.07
RFPL1O75677 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.72■■□□□ 1.07
RFPL1O75677 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFPL1O75677 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFPL1O75677 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFPL1O75677 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFPL1O75677 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
RFPL1O75677 AC244015.2-201ENST00000616358 1861 ntBASIC21.71■■□□□ 1.07
RFPL1O75677 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFPL1O75677 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFPL1O75677 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RFPL1O75677 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.71■■□□□ 1.07
RFPL1O75677 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
RFPL1O75677 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.71■■□□□ 1.07
RFPL1O75677 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
RFPL1O75677 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFPL1O75677 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.71■■□□□ 1.07
RFPL1O75677 AC005229.4-201ENST00000610085 2198 ntBASIC21.71■■□□□ 1.07
RFPL1O75677 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
RFPL1O75677 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RFPL1O75677 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RFPL1O75677 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.7■■□□□ 1.06
RFPL1O75677 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RFPL1O75677 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.7■■□□□ 1.06
RFPL1O75677 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.7■■□□□ 1.06
RFPL1O75677 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.7■■□□□ 1.06
RFPL1O75677 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.7■■□□□ 1.06
RFPL1O75677 C17orf82-201ENST00000623772 1530 ntBASIC21.7■■□□□ 1.06
RFPL1O75677 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
RFPL1O75677 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFPL1O75677 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFPL1O75677 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
RFPL1O75677 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms