Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
USH2AO75445 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
USH2AO75445 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
USH2AO75445 TERF1P5-201ENST00000477545 1207 ntBASIC9.84□□□□□ -0.83
USH2AO75445 AC097493.4-201ENST00000641197 219 ntBASIC9.84□□□□□ -0.83
USH2AO75445 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
USH2AO75445 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
USH2AO75445 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC9.84□□□□□ -0.83
USH2AO75445 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
USH2AO75445 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
USH2AO75445 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC9.84□□□□□ -0.83
USH2AO75445 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
USH2AO75445 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC9.84□□□□□ -0.83
USH2AO75445 C2orf69P4-201ENST00000565394 541 ntBASIC9.84□□□□□ -0.83
USH2AO75445 REXO1L12P-201ENST00000622156 912 ntBASIC9.84□□□□□ -0.83
USH2AO75445 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
USH2AO75445 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
USH2AO75445 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC9.84□□□□□ -0.83
USH2AO75445 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC9.84□□□□□ -0.83
USH2AO75445 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC9.84□□□□□ -0.83
USH2AO75445 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC9.84□□□□□ -0.83
USH2AO75445 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
USH2AO75445 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
USH2AO75445 FP325331.1-202ENST00000623531 1380 ntBASIC9.84□□□□□ -0.83
USH2AO75445 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
USH2AO75445 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
USH2AO75445 GAS7-202ENST00000396115 929 ntTSL 5 BASIC9.83□□□□□ -0.84
USH2AO75445 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC9.83□□□□□ -0.84
USH2AO75445 MYCNOS-205ENST00000641950 531 ntBASIC9.83□□□□□ -0.84
USH2AO75445 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
USH2AO75445 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
USH2AO75445 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
USH2AO75445 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
USH2AO75445 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
USH2AO75445 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC9.83□□□□□ -0.84
USH2AO75445 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC9.83□□□□□ -0.84
USH2AO75445 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC9.83□□□□□ -0.84
USH2AO75445 SERP1-208ENST00000491660 830 ntTSL 2 BASIC9.83□□□□□ -0.84
USH2AO75445 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
USH2AO75445 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
USH2AO75445 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
USH2AO75445 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC9.83□□□□□ -0.84
USH2AO75445 AC133561.5-201ENST00000635547 218 ntBASIC9.83□□□□□ -0.84
USH2AO75445 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
USH2AO75445 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
USH2AO75445 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC9.83□□□□□ -0.84
USH2AO75445 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
USH2AO75445 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
USH2AO75445 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
USH2AO75445 AP003097.1-201ENST00000530657 1135 ntBASIC9.83□□□□□ -0.84
USH2AO75445 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC9.83□□□□□ -0.84
USH2AO75445 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC9.83□□□□□ -0.84
USH2AO75445 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
USH2AO75445 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
USH2AO75445 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC9.83□□□□□ -0.84
USH2AO75445 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
USH2AO75445 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
USH2AO75445 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC9.83□□□□□ -0.84
USH2AO75445 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC9.83□□□□□ -0.84
USH2AO75445 RPPH1-201ENST00000516869 333 ntBASIC9.83□□□□□ -0.84
USH2AO75445 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC9.83□□□□□ -0.84
USH2AO75445 REXO2-216ENST00000544196 452 ntTSL 3 BASIC9.83□□□□□ -0.84
USH2AO75445 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC9.83□□□□□ -0.84
USH2AO75445 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
USH2AO75445 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC9.83□□□□□ -0.84
USH2AO75445 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
USH2AO75445 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
USH2AO75445 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
USH2AO75445 TK2-213ENST00000563369 882 ntTSL 5 BASIC9.82□□□□□ -0.84
USH2AO75445 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
USH2AO75445 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC9.82□□□□□ -0.84
USH2AO75445 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
USH2AO75445 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
USH2AO75445 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
USH2AO75445 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
USH2AO75445 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
USH2AO75445 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
USH2AO75445 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC9.82□□□□□ -0.84
USH2AO75445 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
USH2AO75445 OR2A1-AS1-201ENST00000462305 773 ntBASIC9.82□□□□□ -0.84
USH2AO75445 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC9.82□□□□□ -0.84
USH2AO75445 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC9.82□□□□□ -0.84
USH2AO75445 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC9.82□□□□□ -0.84
USH2AO75445 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
USH2AO75445 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC9.82□□□□□ -0.84
USH2AO75445 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
USH2AO75445 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
USH2AO75445 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC9.81□□□□□ -0.84
USH2AO75445 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
USH2AO75445 AC008694.1-202ENST00000636953 945 ntBASIC9.81□□□□□ -0.84
USH2AO75445 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
USH2AO75445 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
USH2AO75445 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
USH2AO75445 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
USH2AO75445 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC9.81□□□□□ -0.84
USH2AO75445 BET1L-204ENST00000410108 637 ntTSL 3 BASIC9.81□□□□□ -0.84
USH2AO75445 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC9.81□□□□□ -0.84
USH2AO75445 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC9.81□□□□□ -0.84
USH2AO75445 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC9.81□□□□□ -0.84
USH2AO75445 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms