Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 C17orf82-201ENST00000623772 1530 ntBASIC23.23■■□□□ 1.31
RNF40O75150 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
RNF40O75150 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RNF40O75150 PLD4-205ENST00000553861 667 ntTSL 2 BASIC23.22■■□□□ 1.31
RNF40O75150 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC23.22■■□□□ 1.31
RNF40O75150 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
RNF40O75150 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
RNF40O75150 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RNF40O75150 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
RNF40O75150 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RNF40O75150 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
RNF40O75150 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
RNF40O75150 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
RNF40O75150 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.21■■□□□ 1.31
RNF40O75150 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.21■■□□□ 1.31
RNF40O75150 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC23.21■■□□□ 1.31
RNF40O75150 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
RNF40O75150 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC23.2■■□□□ 1.3
RNF40O75150 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC23.2■■□□□ 1.3
RNF40O75150 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.2■■□□□ 1.3
RNF40O75150 ESRRAP2-201ENST00000418437 1549 ntBASIC23.2■■□□□ 1.3
RNF40O75150 IRS3P-201ENST00000223076 1006 ntBASIC23.2■■□□□ 1.3
RNF40O75150 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RNF40O75150 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.2■■□□□ 1.3
RNF40O75150 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC23.2■■□□□ 1.3
RNF40O75150 AL162430.1-201ENST00000480705 870 ntBASIC23.2■■□□□ 1.3
RNF40O75150 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC23.2■■□□□ 1.3
RNF40O75150 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC23.2■■□□□ 1.3
RNF40O75150 AC241377.3-202ENST00000626088 1088 ntBASIC23.2■■□□□ 1.3
RNF40O75150 AC241585.3-202ENST00000628937 1088 ntBASIC23.2■■□□□ 1.3
RNF40O75150 AC245100.8-202ENST00000629247 1058 ntBASIC23.2■■□□□ 1.3
RNF40O75150 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC23.2■■□□□ 1.3
RNF40O75150 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RNF40O75150 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
RNF40O75150 AC073130.3-201ENST00000624389 2278 ntBASIC23.2■■□□□ 1.3
RNF40O75150 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RNF40O75150 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RNF40O75150 H19-210ENST00000439725 1929 ntTSL 2 BASIC23.2■■□□□ 1.3
RNF40O75150 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RNF40O75150 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.19■■□□□ 1.3
RNF40O75150 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
RNF40O75150 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RNF40O75150 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
RNF40O75150 FBXW4P1-201ENST00000426721 2239 ntBASIC23.19■■□□□ 1.3
RNF40O75150 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RNF40O75150 AC006455.2-201ENST00000429931 906 ntBASIC23.19■■□□□ 1.3
RNF40O75150 AL121603.2-201ENST00000557373 2117 ntBASIC23.19■■□□□ 1.3
RNF40O75150 AC136469.2-201ENST00000623944 1028 ntBASIC23.19■■□□□ 1.3
RNF40O75150 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RNF40O75150 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
RNF40O75150 EI24-213ENST00000618552 1747 ntTSL 5 BASIC23.19■■□□□ 1.3
RNF40O75150 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
RNF40O75150 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
RNF40O75150 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC23.18■■□□□ 1.3
RNF40O75150 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RNF40O75150 C11orf96-202ENST00000528572 1834 ntBASIC23.18■■□□□ 1.3
RNF40O75150 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RNF40O75150 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RNF40O75150 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RNF40O75150 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.18■■□□□ 1.3
RNF40O75150 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC23.18■■□□□ 1.3
RNF40O75150 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RNF40O75150 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RNF40O75150 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RNF40O75150 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RNF40O75150 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RNF40O75150 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
RNF40O75150 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RNF40O75150 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC23.17■■□□□ 1.3
RNF40O75150 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RNF40O75150 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC23.17■■□□□ 1.3
RNF40O75150 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.17■■□□□ 1.3
RNF40O75150 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.17■■□□□ 1.3
RNF40O75150 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RNF40O75150 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
RNF40O75150 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RNF40O75150 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
RNF40O75150 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
RNF40O75150 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC23.17■■□□□ 1.3
RNF40O75150 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
RNF40O75150 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
RNF40O75150 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RNF40O75150 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RNF40O75150 RHOF-204ENST00000537265 699 ntTSL 2 BASIC23.16■■□□□ 1.3
RNF40O75150 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC23.16■■□□□ 1.3
RNF40O75150 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC23.16■■□□□ 1.3
RNF40O75150 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RNF40O75150 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RNF40O75150 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RNF40O75150 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC23.16■■□□□ 1.3
RNF40O75150 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
RNF40O75150 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
RNF40O75150 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RNF40O75150 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.15■■□□□ 1.3
RNF40O75150 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RNF40O75150 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RNF40O75150 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RNF40O75150 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RNF40O75150 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC23.15■■□□□ 1.3
RNF40O75150 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms