Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC30.18■■■□□ 2.42
BRD4O60885 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
BRD4O60885 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
BRD4O60885 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
BRD4O60885 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC30.17■■■□□ 2.42
BRD4O60885 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC30.17■■■□□ 2.42
BRD4O60885 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC30.16■■■□□ 2.42
BRD4O60885 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
BRD4O60885 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
BRD4O60885 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC30.16■■■□□ 2.42
BRD4O60885 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
BRD4O60885 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
BRD4O60885 BX005040.4-201ENST00000637145 1518 ntBASIC30.16■■■□□ 2.42
BRD4O60885 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
BRD4O60885 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
BRD4O60885 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC30.16■■■□□ 2.42
BRD4O60885 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC30.16■■■□□ 2.42
BRD4O60885 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC30.15■■■□□ 2.42
BRD4O60885 AP004607.4-201ENST00000530158 1459 ntBASIC30.15■■■□□ 2.42
BRD4O60885 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC30.15■■■□□ 2.42
BRD4O60885 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
BRD4O60885 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC30.15■■■□□ 2.42
BRD4O60885 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
BRD4O60885 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
BRD4O60885 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC30.15■■■□□ 2.42
BRD4O60885 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
BRD4O60885 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC30.15■■■□□ 2.42
BRD4O60885 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC30.15■■■□□ 2.42
BRD4O60885 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC30.15■■■□□ 2.42
BRD4O60885 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC30.15■■■□□ 2.42
BRD4O60885 AC080038.1-201ENST00000611274 1154 ntBASIC30.15■■■□□ 2.42
BRD4O60885 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
BRD4O60885 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
BRD4O60885 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC30.14■■■□□ 2.42
BRD4O60885 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
BRD4O60885 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
BRD4O60885 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC30.14■■■□□ 2.42
BRD4O60885 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC30.14■■■□□ 2.41
BRD4O60885 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC30.14■■■□□ 2.41
BRD4O60885 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC30.14■■■□□ 2.41
BRD4O60885 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC30.14■■■□□ 2.41
BRD4O60885 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC30.14■■■□□ 2.41
BRD4O60885 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC30.13■■■□□ 2.41
BRD4O60885 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC30.13■■■□□ 2.41
BRD4O60885 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
BRD4O60885 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC30.13■■■□□ 2.41
BRD4O60885 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
BRD4O60885 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC30.13■■■□□ 2.41
BRD4O60885 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC30.13■■■□□ 2.41
BRD4O60885 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC30.13■■■□□ 2.41
BRD4O60885 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC30.13■■■□□ 2.41
BRD4O60885 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
BRD4O60885 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
BRD4O60885 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC30.12■■■□□ 2.41
BRD4O60885 STX7-201ENST00000367937 1090 ntTSL 5 BASIC30.12■■■□□ 2.41
BRD4O60885 DENND3-207ENST00000518347 850 ntTSL 2 BASIC30.12■■■□□ 2.41
BRD4O60885 AC137761.2-201ENST00000561729 223 ntBASIC30.12■■■□□ 2.41
BRD4O60885 AC145350.3-201ENST00000569033 163 ntBASIC30.12■■■□□ 2.41
BRD4O60885 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC30.11■■■□□ 2.41
BRD4O60885 GALC-202ENST00000393568 2054 ntTSL 2 BASIC30.11■■■□□ 2.41
BRD4O60885 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC30.11■■■□□ 2.41
BRD4O60885 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
BRD4O60885 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
BRD4O60885 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
BRD4O60885 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC30.11■■■□□ 2.41
BRD4O60885 DBI-210ENST00000542275 757 ntTSL 5 BASIC30.11■■■□□ 2.41
BRD4O60885 AC087239.1-201ENST00000622671 572 ntBASIC30.11■■■□□ 2.41
BRD4O60885 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC30.1■■■□□ 2.41
BRD4O60885 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
BRD4O60885 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC30.1■■■□□ 2.41
BRD4O60885 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC30.1■■■□□ 2.41
BRD4O60885 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC30.1■■■□□ 2.41
BRD4O60885 AC010141.3-201ENST00000456659 717 ntBASIC30.1■■■□□ 2.41
BRD4O60885 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC30.1■■■□□ 2.41
BRD4O60885 SMUG1P1-201ENST00000590640 811 ntBASIC30.1■■■□□ 2.41
BRD4O60885 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC30.1■■■□□ 2.41
BRD4O60885 CPT2-209ENST00000636935 803 ntTSL 5 BASIC30.1■■■□□ 2.41
BRD4O60885 AC073111.5-205ENST00000641717 521 ntBASIC30.1■■■□□ 2.41
BRD4O60885 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
BRD4O60885 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
BRD4O60885 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
BRD4O60885 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC30.09■■■□□ 2.41
BRD4O60885 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC30.09■■■□□ 2.41
BRD4O60885 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC30.09■■■□□ 2.41
BRD4O60885 COX20-201ENST00000366528 568 ntTSL 2 BASIC30.09■■■□□ 2.41
BRD4O60885 AC016769.1-201ENST00000409132 1010 ntBASIC30.09■■■□□ 2.41
BRD4O60885 HLA-L-209ENST00000420110 1011 ntBASIC30.09■■■□□ 2.41
BRD4O60885 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
BRD4O60885 CDCA4P2-201ENST00000441182 718 ntBASIC30.09■■■□□ 2.41
BRD4O60885 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC30.09■■■□□ 2.41
BRD4O60885 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC30.09■■■□□ 2.41
BRD4O60885 C1orf229-201ENST00000623686 2258 ntBASIC30.09■■■□□ 2.41
BRD4O60885 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC30.09■■■□□ 2.41
BRD4O60885 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC30.09■■■□□ 2.41
BRD4O60885 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
BRD4O60885 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC30.08■■■□□ 2.41
BRD4O60885 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC30.08■■■□□ 2.41
BRD4O60885 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC30.08■■■□□ 2.41
BRD4O60885 AC004854.2-201ENST00000608450 1441 ntBASIC30.08■■■□□ 2.41
BRD4O60885 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms