Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PEX1O43933 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.01■□□□□ 0.95
PEX1O43933 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.01■□□□□ 0.95
PEX1O43933 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PEX1O43933 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PEX1O43933 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.01■□□□□ 0.95
PEX1O43933 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
PEX1O43933 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PEX1O43933 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PEX1O43933 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PEX1O43933 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
PEX1O43933 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PEX1O43933 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
PEX1O43933 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
PEX1O43933 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
PEX1O43933 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PEX1O43933 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
PEX1O43933 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
PEX1O43933 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21■□□□□ 0.95
PEX1O43933 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PEX1O43933 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21■□□□□ 0.95
PEX1O43933 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PEX1O43933 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21■□□□□ 0.95
PEX1O43933 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21■□□□□ 0.95
PEX1O43933 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PEX1O43933 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
PEX1O43933 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PEX1O43933 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
PEX1O43933 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21■□□□□ 0.95
PEX1O43933 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PEX1O43933 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PEX1O43933 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
PEX1O43933 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.99■□□□□ 0.95
PEX1O43933 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PEX1O43933 AL139246.5-201ENST00000606645 996 ntBASIC20.99■□□□□ 0.95
PEX1O43933 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
PEX1O43933 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.99■□□□□ 0.95
PEX1O43933 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.99■□□□□ 0.95
PEX1O43933 AC005703.6-201ENST00000623265 1329 ntBASIC20.99■□□□□ 0.95
PEX1O43933 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.99■□□□□ 0.95
PEX1O43933 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PEX1O43933 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PEX1O43933 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
PEX1O43933 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
PEX1O43933 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.98■□□□□ 0.95
PEX1O43933 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PEX1O43933 AC080038.3-201ENST00000623346 1952 ntBASIC20.98■□□□□ 0.95
PEX1O43933 AL022069.1-201ENST00000568025 1636 ntBASIC20.98■□□□□ 0.95
PEX1O43933 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.98■□□□□ 0.95
PEX1O43933 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.98■□□□□ 0.95
PEX1O43933 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
PEX1O43933 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
PEX1O43933 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PEX1O43933 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.97■□□□□ 0.95
PEX1O43933 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.97■□□□□ 0.95
PEX1O43933 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PEX1O43933 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PEX1O43933 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PEX1O43933 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.97■□□□□ 0.95
PEX1O43933 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PEX1O43933 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PEX1O43933 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PEX1O43933 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PEX1O43933 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
PEX1O43933 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
PEX1O43933 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
PEX1O43933 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PEX1O43933 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PEX1O43933 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PEX1O43933 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PEX1O43933 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.97■□□□□ 0.95
PEX1O43933 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PEX1O43933 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PEX1O43933 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.96■□□□□ 0.95
PEX1O43933 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.96■□□□□ 0.95
PEX1O43933 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PEX1O43933 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PEX1O43933 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PEX1O43933 FAM99A-202ENST00000538190 1989 ntBASIC20.96■□□□□ 0.95
PEX1O43933 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PEX1O43933 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.96■□□□□ 0.95
PEX1O43933 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PEX1O43933 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PEX1O43933 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PEX1O43933 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
PEX1O43933 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
PEX1O43933 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PEX1O43933 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PEX1O43933 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PEX1O43933 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PEX1O43933 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PEX1O43933 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
PEX1O43933 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.95■□□□□ 0.95
PEX1O43933 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
PEX1O43933 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PEX1O43933 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PEX1O43933 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PEX1O43933 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PEX1O43933 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PEX1O43933 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms