Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.17■□□□□ 0.98
CDX4O14627 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.17■□□□□ 0.98
CDX4O14627 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDX4O14627 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
CDX4O14627 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CDX4O14627 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDX4O14627 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CDX4O14627 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDX4O14627 AL353803.4-201ENST00000565882 1934 ntBASIC21.16■□□□□ 0.98
CDX4O14627 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.16■□□□□ 0.98
CDX4O14627 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CDX4O14627 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.16■□□□□ 0.98
CDX4O14627 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDX4O14627 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.16■□□□□ 0.98
CDX4O14627 AC098590.1-201ENST00000468126 897 ntBASIC21.16■□□□□ 0.98
CDX4O14627 SLC7A5P1-201ENST00000568957 537 ntBASIC21.16■□□□□ 0.98
CDX4O14627 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDX4O14627 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDX4O14627 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDX4O14627 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDX4O14627 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDX4O14627 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDX4O14627 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.15■□□□□ 0.98
CDX4O14627 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDX4O14627 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.15■□□□□ 0.98
CDX4O14627 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDX4O14627 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDX4O14627 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.15■□□□□ 0.98
CDX4O14627 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDX4O14627 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CDX4O14627 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
CDX4O14627 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.14■□□□□ 0.98
CDX4O14627 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CDX4O14627 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CDX4O14627 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDX4O14627 DUSP5P2-201ENST00000426873 1033 ntBASIC21.14■□□□□ 0.97
CDX4O14627 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.14■□□□□ 0.97
CDX4O14627 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.14■□□□□ 0.97
CDX4O14627 KRT18P20-201ENST00000548986 1279 ntBASIC21.14■□□□□ 0.97
CDX4O14627 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
CDX4O14627 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.14■□□□□ 0.97
CDX4O14627 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.14■□□□□ 0.97
CDX4O14627 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDX4O14627 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDX4O14627 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.13■□□□□ 0.97
CDX4O14627 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.13■□□□□ 0.97
CDX4O14627 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.13■□□□□ 0.97
CDX4O14627 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
CDX4O14627 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.13■□□□□ 0.97
CDX4O14627 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDX4O14627 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CDX4O14627 AP006294.2-201ENST00000641667 209 ntBASIC21.13■□□□□ 0.97
CDX4O14627 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDX4O14627 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CDX4O14627 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDX4O14627 AC068338.2-201ENST00000563278 1430 ntBASIC21.12■□□□□ 0.97
CDX4O14627 AC055733.4-201ENST00000638462 1354 ntBASIC21.12■□□□□ 0.97
CDX4O14627 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
CDX4O14627 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDX4O14627 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDX4O14627 AC010141.2-201ENST00000452426 721 ntBASIC21.12■□□□□ 0.97
CDX4O14627 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.12■□□□□ 0.97
CDX4O14627 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDX4O14627 MKRN4P-201ENST00000444706 1521 ntBASIC21.12■□□□□ 0.97
CDX4O14627 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDX4O14627 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDX4O14627 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDX4O14627 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.11■□□□□ 0.97
CDX4O14627 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CDX4O14627 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.11■□□□□ 0.97
CDX4O14627 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.11■□□□□ 0.97
CDX4O14627 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
CDX4O14627 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.11■□□□□ 0.97
CDX4O14627 AC138907.5-202ENST00000569484 235 ntBASIC21.11■□□□□ 0.97
CDX4O14627 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDX4O14627 AC013268.1-206ENST00000638368 961 ntBASIC21.11■□□□□ 0.97
CDX4O14627 AC112229.1-201ENST00000639295 961 ntBASIC21.11■□□□□ 0.97
CDX4O14627 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CDX4O14627 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDX4O14627 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDX4O14627 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDX4O14627 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDX4O14627 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.1■□□□□ 0.97
CDX4O14627 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.1■□□□□ 0.97
CDX4O14627 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDX4O14627 GCSHP5-201ENST00000443090 522 ntBASIC21.1■□□□□ 0.97
CDX4O14627 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.1■□□□□ 0.97
CDX4O14627 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDX4O14627 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.1■□□□□ 0.97
CDX4O14627 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.1■□□□□ 0.97
CDX4O14627 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDX4O14627 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
CDX4O14627 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDX4O14627 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDX4O14627 DUSP8P3-201ENST00000399571 1760 ntBASIC21.1■□□□□ 0.97
CDX4O14627 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.1■□□□□ 0.97
CDX4O14627 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CDX4O14627 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDX4O14627 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDX4O14627 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms