Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC37.76■■■■□ 3.63
CUX2O14529 RNF146-206ENST00000480444 843 ntTSL 2 BASIC37.76■■■■□ 3.63
CUX2O14529 INO80E-214ENST00000620599 515 ntTSL 2 BASIC37.76■■■■□ 3.63
CUX2O14529 AC013268.1-206ENST00000638368 961 ntBASIC37.76■■■■□ 3.63
CUX2O14529 AC112229.1-201ENST00000639295 961 ntBASIC37.76■■■■□ 3.63
CUX2O14529 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC37.76■■■■□ 3.63
CUX2O14529 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC37.75■■■■□ 3.63
CUX2O14529 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC37.75■■■■□ 3.63
CUX2O14529 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC37.75■■■■□ 3.63
CUX2O14529 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC37.75■■■■□ 3.63
CUX2O14529 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC37.75■■■■□ 3.63
CUX2O14529 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC37.75■■■■□ 3.63
CUX2O14529 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC37.75■■■■□ 3.63
CUX2O14529 EI24-204ENST00000527235 1625 ntTSL 5 BASIC37.74■■■■□ 3.63
CUX2O14529 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC37.74■■■■□ 3.63
CUX2O14529 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC37.74■■■■□ 3.63
CUX2O14529 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC37.74■■■■□ 3.63
CUX2O14529 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC37.74■■■■□ 3.63
CUX2O14529 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC37.74■■■■□ 3.63
CUX2O14529 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC37.74■■■■□ 3.63
CUX2O14529 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC37.74■■■■□ 3.63
CUX2O14529 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC37.73■■■■□ 3.63
CUX2O14529 HLA-L-211ENST00000482052 1765 ntBASIC37.73■■■■□ 3.63
CUX2O14529 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC37.73■■■■□ 3.63
CUX2O14529 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC37.73■■■■□ 3.63
CUX2O14529 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC37.73■■■■□ 3.63
CUX2O14529 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC37.73■■■■□ 3.63
CUX2O14529 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC37.73■■■■□ 3.63
CUX2O14529 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC37.72■■■■□ 3.63
CUX2O14529 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC37.72■■■■□ 3.63
CUX2O14529 RCN1P1-201ENST00000400413 996 ntBASIC37.72■■■■□ 3.63
CUX2O14529 AC097658.1-201ENST00000475555 843 ntBASIC37.72■■■■□ 3.63
CUX2O14529 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC37.72■■■■□ 3.63
CUX2O14529 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC37.72■■■■□ 3.63
CUX2O14529 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC37.72■■■■□ 3.63
CUX2O14529 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC37.72■■■■□ 3.63
CUX2O14529 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC37.71■■■■□ 3.63
CUX2O14529 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC37.71■■■■□ 3.63
CUX2O14529 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC37.71■■■■□ 3.63
CUX2O14529 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC37.71■■■■□ 3.63
CUX2O14529 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC37.71■■■■□ 3.63
CUX2O14529 RNF121-214ENST00000533380 870 ntTSL 3 BASIC37.71■■■■□ 3.63
CUX2O14529 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC37.71■■■■□ 3.63
CUX2O14529 OR10C1-204ENST00000622521 1039 ntBASIC37.71■■■■□ 3.63
CUX2O14529 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC37.71■■■■□ 3.63
CUX2O14529 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC37.71■■■■□ 3.63
CUX2O14529 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC37.71■■■■□ 3.63
CUX2O14529 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC37.71■■■■□ 3.63
CUX2O14529 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC37.71■■■■□ 3.63
CUX2O14529 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC37.71■■■■□ 3.63
CUX2O14529 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC37.71■■■■□ 3.63
CUX2O14529 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC37.71■■■■□ 3.63
CUX2O14529 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC37.71■■■■□ 3.63
CUX2O14529 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC37.7■■■■□ 3.63
CUX2O14529 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC37.7■■■■□ 3.63
CUX2O14529 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC37.7■■■■□ 3.63
CUX2O14529 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC37.7■■■■□ 3.63
CUX2O14529 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC37.7■■■■□ 3.63
CUX2O14529 AC068338.2-201ENST00000563278 1430 ntBASIC37.7■■■■□ 3.63
CUX2O14529 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC37.7■■■■□ 3.63
CUX2O14529 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC37.69■■■■□ 3.62
CUX2O14529 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC37.69■■■■□ 3.62
CUX2O14529 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC37.69■■■■□ 3.62
CUX2O14529 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC37.69■■■■□ 3.62
CUX2O14529 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC37.69■■■■□ 3.62
CUX2O14529 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC37.69■■■■□ 3.62
CUX2O14529 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC37.69■■■■□ 3.62
CUX2O14529 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC37.69■■■■□ 3.62
CUX2O14529 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC37.69■■■■□ 3.62
CUX2O14529 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC37.69■■■■□ 3.62
CUX2O14529 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC37.69■■■■□ 3.62
CUX2O14529 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC37.69■■■■□ 3.62
CUX2O14529 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC37.68■■■■□ 3.62
CUX2O14529 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC37.68■■■■□ 3.62
CUX2O14529 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC37.68■■■■□ 3.62
CUX2O14529 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC37.68■■■■□ 3.62
CUX2O14529 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC37.68■■■■□ 3.62
CUX2O14529 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC37.68■■■■□ 3.62
CUX2O14529 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC37.68■■■■□ 3.62
CUX2O14529 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC37.68■■■■□ 3.62
CUX2O14529 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC37.68■■■■□ 3.62
CUX2O14529 FP325331.1-202ENST00000623531 1380 ntBASIC37.67■■■■□ 3.62
CUX2O14529 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC37.67■■■■□ 3.62
CUX2O14529 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC37.67■■■■□ 3.62
CUX2O14529 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC37.67■■■■□ 3.62
CUX2O14529 AC093787.1-201ENST00000450396 207 ntBASIC37.67■■■■□ 3.62
CUX2O14529 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC37.67■■■■□ 3.62
CUX2O14529 AC091874.3-201ENST00000512672 1195 ntBASIC37.67■■■■□ 3.62
CUX2O14529 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC37.67■■■■□ 3.62
CUX2O14529 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC37.67■■■■□ 3.62
CUX2O14529 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC37.67■■■■□ 3.62
CUX2O14529 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC37.67■■■■□ 3.62
CUX2O14529 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC37.66■■■■□ 3.62
CUX2O14529 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC37.66■■■■□ 3.62
CUX2O14529 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC37.66■■■■□ 3.62
CUX2O14529 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC37.66■■■■□ 3.62
CUX2O14529 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC37.65■■■■□ 3.62
CUX2O14529 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC37.65■■■■□ 3.62
CUX2O14529 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC37.65■■■■□ 3.62
CUX2O14529 AC007322.4-201ENST00000509611 723 ntBASIC37.65■■■■□ 3.62
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms