Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.13■□□□□ 0.33
LINC01548A6NM66 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.13■□□□□ 0.33
LINC01548A6NM66 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.13■□□□□ 0.33
LINC01548A6NM66 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.13■□□□□ 0.33
LINC01548A6NM66 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.13■□□□□ 0.33
LINC01548A6NM66 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.13■□□□□ 0.33
LINC01548A6NM66 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LINC01548A6NM66 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINC01548A6NM66 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINC01548A6NM66 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINC01548A6NM66 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINC01548A6NM66 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC01548A6NM66 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
LINC01548A6NM66 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC01548A6NM66 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC01548A6NM66 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC01548A6NM66 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC17.12■□□□□ 0.33
LINC01548A6NM66 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC01548A6NM66 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.12■□□□□ 0.33
LINC01548A6NM66 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC01548A6NM66 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LINC01548A6NM66 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.12■□□□□ 0.33
LINC01548A6NM66 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
LINC01548A6NM66 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC01548A6NM66 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LINC01548A6NM66 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC01548A6NM66 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.12■□□□□ 0.33
LINC01548A6NM66 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.12■□□□□ 0.33
LINC01548A6NM66 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC01548A6NM66 AL358852.1-201ENST00000623174 1268 ntBASIC17.12■□□□□ 0.33
LINC01548A6NM66 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC01548A6NM66 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LINC01548A6NM66 AC233723.2-201ENST00000623798 2106 ntBASIC17.12■□□□□ 0.33
LINC01548A6NM66 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LINC01548A6NM66 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC01548A6NM66 ESRRAP2-201ENST00000418437 1549 ntBASIC17.11■□□□□ 0.33
LINC01548A6NM66 AC139530.1-201ENST00000575312 1977 ntBASIC17.11■□□□□ 0.33
LINC01548A6NM66 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC17.11■□□□□ 0.33
LINC01548A6NM66 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LINC01548A6NM66 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
LINC01548A6NM66 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LINC01548A6NM66 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LINC01548A6NM66 AC026271.2-201ENST00000428091 497 ntBASIC17.11■□□□□ 0.33
LINC01548A6NM66 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.11■□□□□ 0.33
LINC01548A6NM66 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.11■□□□□ 0.33
LINC01548A6NM66 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LINC01548A6NM66 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LINC01548A6NM66 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LINC01548A6NM66 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC17.11■□□□□ 0.33
LINC01548A6NM66 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.11■□□□□ 0.33
LINC01548A6NM66 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.11■□□□□ 0.33
LINC01548A6NM66 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LINC01548A6NM66 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LINC01548A6NM66 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.1■□□□□ 0.33
LINC01548A6NM66 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LINC01548A6NM66 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
LINC01548A6NM66 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
LINC01548A6NM66 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LINC01548A6NM66 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC01548A6NM66 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.1■□□□□ 0.33
LINC01548A6NM66 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.1■□□□□ 0.33
LINC01548A6NM66 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
LINC01548A6NM66 RARRES2P6-201ENST00000567333 442 ntBASIC17.1■□□□□ 0.33
LINC01548A6NM66 AL354811.1-201ENST00000610286 706 ntBASIC17.1■□□□□ 0.33
LINC01548A6NM66 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
LINC01548A6NM66 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LINC01548A6NM66 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LINC01548A6NM66 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC01548A6NM66 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC01548A6NM66 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC01548A6NM66 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC01548A6NM66 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC17.1■□□□□ 0.33
LINC01548A6NM66 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC01548A6NM66 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
LINC01548A6NM66 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.09■□□□□ 0.33
LINC01548A6NM66 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC01548A6NM66 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC01548A6NM66 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.09■□□□□ 0.33
LINC01548A6NM66 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
LINC01548A6NM66 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17.09■□□□□ 0.33
LINC01548A6NM66 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC01548A6NM66 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.09■□□□□ 0.33
LINC01548A6NM66 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LINC01548A6NM66 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC01548A6NM66 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LINC01548A6NM66 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.09■□□□□ 0.33
LINC01548A6NM66 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC01548A6NM66 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LINC01548A6NM66 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LINC01548A6NM66 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LINC01548A6NM66 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.08■□□□□ 0.33
LINC01548A6NM66 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC17.08■□□□□ 0.33
LINC01548A6NM66 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LINC01548A6NM66 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINC01548A6NM66 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LINC01548A6NM66 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.08■□□□□ 0.32
LINC01548A6NM66 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINC01548A6NM66 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.08■□□□□ 0.32
LINC01548A6NM66 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINC01548A6NM66 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms