Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CAPN8A6NHC0 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.97■■□□□ 1.11
CAPN8A6NHC0 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
CAPN8A6NHC0 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CAPN8A6NHC0 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CAPN8A6NHC0 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.97■■□□□ 1.11
CAPN8A6NHC0 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CAPN8A6NHC0 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CAPN8A6NHC0 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.96■■□□□ 1.11
CAPN8A6NHC0 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.96■■□□□ 1.11
CAPN8A6NHC0 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CAPN8A6NHC0 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.96■■□□□ 1.11
CAPN8A6NHC0 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CAPN8A6NHC0 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CAPN8A6NHC0 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.95■■□□□ 1.1
CAPN8A6NHC0 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CAPN8A6NHC0 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
CAPN8A6NHC0 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CAPN8A6NHC0 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.95■■□□□ 1.1
CAPN8A6NHC0 IGHV3-19-201ENST00000521488 291 ntBASIC21.95■■□□□ 1.1
CAPN8A6NHC0 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.95■■□□□ 1.1
CAPN8A6NHC0 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
CAPN8A6NHC0 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CAPN8A6NHC0 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CAPN8A6NHC0 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
CAPN8A6NHC0 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CAPN8A6NHC0 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
CAPN8A6NHC0 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
CAPN8A6NHC0 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
CAPN8A6NHC0 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CAPN8A6NHC0 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CAPN8A6NHC0 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CAPN8A6NHC0 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CAPN8A6NHC0 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
CAPN8A6NHC0 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.94■■□□□ 1.1
CAPN8A6NHC0 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.94■■□□□ 1.1
CAPN8A6NHC0 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.94■■□□□ 1.1
CAPN8A6NHC0 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CAPN8A6NHC0 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CAPN8A6NHC0 C1orf229-201ENST00000623686 2258 ntBASIC21.94■■□□□ 1.1
CAPN8A6NHC0 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CAPN8A6NHC0 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CAPN8A6NHC0 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CAPN8A6NHC0 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CAPN8A6NHC0 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.93■■□□□ 1.1
CAPN8A6NHC0 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.93■■□□□ 1.1
CAPN8A6NHC0 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.93■■□□□ 1.1
CAPN8A6NHC0 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
CAPN8A6NHC0 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.93■■□□□ 1.1
CAPN8A6NHC0 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.93■■□□□ 1.1
CAPN8A6NHC0 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.93■■□□□ 1.1
CAPN8A6NHC0 AC087239.1-201ENST00000622671 572 ntBASIC21.93■■□□□ 1.1
CAPN8A6NHC0 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.93■■□□□ 1.1
CAPN8A6NHC0 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CAPN8A6NHC0 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CAPN8A6NHC0 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.92■■□□□ 1.1
CAPN8A6NHC0 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CAPN8A6NHC0 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CAPN8A6NHC0 AC087742.1-201ENST00000575880 1738 ntBASIC21.92■■□□□ 1.1
CAPN8A6NHC0 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.92■■□□□ 1.1
CAPN8A6NHC0 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CAPN8A6NHC0 AC105265.2-201ENST00000467189 838 ntBASIC21.92■■□□□ 1.1
CAPN8A6NHC0 AL162430.1-201ENST00000480705 870 ntBASIC21.92■■□□□ 1.1
CAPN8A6NHC0 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
CAPN8A6NHC0 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
CAPN8A6NHC0 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.92■■□□□ 1.1
CAPN8A6NHC0 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CAPN8A6NHC0 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CAPN8A6NHC0 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.91■■□□□ 1.1
CAPN8A6NHC0 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.91■■□□□ 1.1
CAPN8A6NHC0 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
CAPN8A6NHC0 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
CAPN8A6NHC0 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CAPN8A6NHC0 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CAPN8A6NHC0 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CAPN8A6NHC0 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.91■■□□□ 1.1
CAPN8A6NHC0 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.91■■□□□ 1.1
CAPN8A6NHC0 AC010141.3-201ENST00000456659 717 ntBASIC21.91■■□□□ 1.1
CAPN8A6NHC0 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CAPN8A6NHC0 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CAPN8A6NHC0 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CAPN8A6NHC0 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.91■■□□□ 1.1
CAPN8A6NHC0 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.91■■□□□ 1.1
CAPN8A6NHC0 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CAPN8A6NHC0 TSPY26P-201ENST00000476365 1326 ntBASIC21.9■■□□□ 1.1
CAPN8A6NHC0 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CAPN8A6NHC0 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CAPN8A6NHC0 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CAPN8A6NHC0 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CAPN8A6NHC0 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.9■■□□□ 1.1
CAPN8A6NHC0 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CAPN8A6NHC0 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CAPN8A6NHC0 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CAPN8A6NHC0 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.1
CAPN8A6NHC0 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CAPN8A6NHC0 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.89■■□□□ 1.1
CAPN8A6NHC0 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.89■■□□□ 1.09
CAPN8A6NHC0 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
CAPN8A6NHC0 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.89■■□□□ 1.09
CAPN8A6NHC0 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms