Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.94■■□□□ 1.42
TRIM49BA6NDI0 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC23.94■■□□□ 1.42
TRIM49BA6NDI0 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.94■■□□□ 1.42
TRIM49BA6NDI0 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
TRIM49BA6NDI0 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
TRIM49BA6NDI0 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
TRIM49BA6NDI0 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
TRIM49BA6NDI0 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.93■■□□□ 1.42
TRIM49BA6NDI0 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC23.93■■□□□ 1.42
TRIM49BA6NDI0 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC23.93■■□□□ 1.42
TRIM49BA6NDI0 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.93■■□□□ 1.42
TRIM49BA6NDI0 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TRIM49BA6NDI0 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
TRIM49BA6NDI0 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TRIM49BA6NDI0 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC23.93■■□□□ 1.42
TRIM49BA6NDI0 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC23.93■■□□□ 1.42
TRIM49BA6NDI0 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
TRIM49BA6NDI0 ME2-206ENST00000638410 2289 ntTSL 5 BASIC23.93■■□□□ 1.42
TRIM49BA6NDI0 ME2-210ENST00000639255 2262 ntTSL 5 BASIC23.93■■□□□ 1.42
TRIM49BA6NDI0 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
TRIM49BA6NDI0 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.92■■□□□ 1.42
TRIM49BA6NDI0 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC23.92■■□□□ 1.42
TRIM49BA6NDI0 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TRIM49BA6NDI0 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TRIM49BA6NDI0 SERBP1P1-201ENST00000396021 1160 ntBASIC23.92■■□□□ 1.42
TRIM49BA6NDI0 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC23.92■■□□□ 1.42
TRIM49BA6NDI0 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.92■■□□□ 1.42
TRIM49BA6NDI0 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
TRIM49BA6NDI0 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC23.92■■□□□ 1.42
TRIM49BA6NDI0 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TRIM49BA6NDI0 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
TRIM49BA6NDI0 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
TRIM49BA6NDI0 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
TRIM49BA6NDI0 OR2I1P-207ENST00000453522 948 ntBASIC23.91■■□□□ 1.42
TRIM49BA6NDI0 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
TRIM49BA6NDI0 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TRIM49BA6NDI0 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC23.91■■□□□ 1.42
TRIM49BA6NDI0 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23.91■■□□□ 1.42
TRIM49BA6NDI0 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
TRIM49BA6NDI0 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC23.91■■□□□ 1.42
TRIM49BA6NDI0 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TRIM49BA6NDI0 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TRIM49BA6NDI0 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23.9■■□□□ 1.42
TRIM49BA6NDI0 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
TRIM49BA6NDI0 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
TRIM49BA6NDI0 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.9■■□□□ 1.42
TRIM49BA6NDI0 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TRIM49BA6NDI0 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TRIM49BA6NDI0 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TRIM49BA6NDI0 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TRIM49BA6NDI0 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
TRIM49BA6NDI0 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC23.89■■□□□ 1.42
TRIM49BA6NDI0 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.42
TRIM49BA6NDI0 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
TRIM49BA6NDI0 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.89■■□□□ 1.42
TRIM49BA6NDI0 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
TRIM49BA6NDI0 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC23.89■■□□□ 1.41
TRIM49BA6NDI0 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
TRIM49BA6NDI0 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC23.88■■□□□ 1.41
TRIM49BA6NDI0 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRIM49BA6NDI0 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRIM49BA6NDI0 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.88■■□□□ 1.41
TRIM49BA6NDI0 AC079089.2-201ENST00000531211 1277 ntBASIC23.88■■□□□ 1.41
TRIM49BA6NDI0 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRIM49BA6NDI0 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRIM49BA6NDI0 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRIM49BA6NDI0 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC23.88■■□□□ 1.41
TRIM49BA6NDI0 AC026471.6-201ENST00000622954 1905 ntBASIC23.88■■□□□ 1.41
TRIM49BA6NDI0 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
TRIM49BA6NDI0 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC23.87■■□□□ 1.41
TRIM49BA6NDI0 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC23.87■■□□□ 1.41
TRIM49BA6NDI0 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRIM49BA6NDI0 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
TRIM49BA6NDI0 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TRIM49BA6NDI0 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TRIM49BA6NDI0 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRIM49BA6NDI0 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.87■■□□□ 1.41
TRIM49BA6NDI0 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.87■■□□□ 1.41
TRIM49BA6NDI0 AC092171.4-201ENST00000609130 632 ntBASIC23.87■■□□□ 1.41
TRIM49BA6NDI0 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
TRIM49BA6NDI0 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRIM49BA6NDI0 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
TRIM49BA6NDI0 AC026310.3-201ENST00000625186 2373 ntBASIC23.87■■□□□ 1.41
TRIM49BA6NDI0 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRIM49BA6NDI0 SYT6-210ENST00000641643 1587 ntBASIC23.86■■□□□ 1.41
TRIM49BA6NDI0 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
TRIM49BA6NDI0 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC23.86■■□□□ 1.41
TRIM49BA6NDI0 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRIM49BA6NDI0 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRIM49BA6NDI0 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
TRIM49BA6NDI0 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.86■■□□□ 1.41
TRIM49BA6NDI0 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.86■■□□□ 1.41
TRIM49BA6NDI0 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.86■■□□□ 1.41
TRIM49BA6NDI0 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRIM49BA6NDI0 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
TRIM49BA6NDI0 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC23.86■■□□□ 1.41
TRIM49BA6NDI0 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC23.86■■□□□ 1.41
TRIM49BA6NDI0 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRIM49BA6NDI0 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
TRIM49BA6NDI0 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23.85■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms