Protein–RNA interactions for Protein: A6NCW7

USP17L4, Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 4, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L4A6NCW7 AL050303.2-201ENST00000619798 666 ntBASIC26.33■■□□□ 1.81
USP17L4A6NCW7 GAMT-205ENST00000640762 751 ntTSL 5 BASIC26.33■■□□□ 1.81
USP17L4A6NCW7 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC26.32■■□□□ 1.8
USP17L4A6NCW7 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
USP17L4A6NCW7 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
USP17L4A6NCW7 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
USP17L4A6NCW7 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
USP17L4A6NCW7 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC26.32■■□□□ 1.8
USP17L4A6NCW7 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
USP17L4A6NCW7 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
USP17L4A6NCW7 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC26.32■■□□□ 1.8
USP17L4A6NCW7 DUX4L16-201ENST00000555130 1264 ntBASIC26.32■■□□□ 1.8
USP17L4A6NCW7 AC142086.2-201ENST00000569753 217 ntBASIC26.32■■□□□ 1.8
USP17L4A6NCW7 AL121832.2-201ENST00000610979 668 ntBASIC26.32■■□□□ 1.8
USP17L4A6NCW7 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
USP17L4A6NCW7 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC26.32■■□□□ 1.8
USP17L4A6NCW7 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
USP17L4A6NCW7 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC26.32■■□□□ 1.8
USP17L4A6NCW7 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
USP17L4A6NCW7 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
USP17L4A6NCW7 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
USP17L4A6NCW7 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
USP17L4A6NCW7 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC26.31■■□□□ 1.8
USP17L4A6NCW7 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
USP17L4A6NCW7 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC26.31■■□□□ 1.8
USP17L4A6NCW7 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC26.31■■□□□ 1.8
USP17L4A6NCW7 AC231657.2-201ENST00000624556 255 ntBASIC26.31■■□□□ 1.8
USP17L4A6NCW7 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC26.31■■□□□ 1.8
USP17L4A6NCW7 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC26.31■■□□□ 1.8
USP17L4A6NCW7 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
USP17L4A6NCW7 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
USP17L4A6NCW7 AC083906.2-201ENST00000511578 360 ntBASIC26.3■■□□□ 1.8
USP17L4A6NCW7 UBE2DNL-204ENST00000602536 740 ntBASIC26.3■■□□□ 1.8
USP17L4A6NCW7 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC26.3■■□□□ 1.8
USP17L4A6NCW7 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
USP17L4A6NCW7 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
USP17L4A6NCW7 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC26.3■■□□□ 1.8
USP17L4A6NCW7 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
USP17L4A6NCW7 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
USP17L4A6NCW7 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
USP17L4A6NCW7 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
USP17L4A6NCW7 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
USP17L4A6NCW7 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
USP17L4A6NCW7 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
USP17L4A6NCW7 PARP1-202ENST00000366792 553 ntTSL 3 BASIC26.29■■□□□ 1.8
USP17L4A6NCW7 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC26.29■■□□□ 1.8
USP17L4A6NCW7 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC26.29■■□□□ 1.8
USP17L4A6NCW7 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
USP17L4A6NCW7 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
USP17L4A6NCW7 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC26.29■■□□□ 1.8
USP17L4A6NCW7 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
USP17L4A6NCW7 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC26.28■■□□□ 1.8
USP17L4A6NCW7 PXK-203ENST00000383715 1756 ntTSL 5 BASIC26.28■■□□□ 1.8
USP17L4A6NCW7 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC26.28■■□□□ 1.8
USP17L4A6NCW7 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC26.28■■□□□ 1.8
USP17L4A6NCW7 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
USP17L4A6NCW7 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
USP17L4A6NCW7 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
USP17L4A6NCW7 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC26.28■■□□□ 1.8
USP17L4A6NCW7 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC26.28■■□□□ 1.8
USP17L4A6NCW7 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
USP17L4A6NCW7 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC26.28■■□□□ 1.8
USP17L4A6NCW7 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
USP17L4A6NCW7 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
USP17L4A6NCW7 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
USP17L4A6NCW7 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
USP17L4A6NCW7 AC007322.1-201ENST00000426983 750 ntBASIC26.27■■□□□ 1.8
USP17L4A6NCW7 APTR-205ENST00000447009 902 ntTSL 2 BASIC26.27■■□□□ 1.8
USP17L4A6NCW7 TSPY6P-201ENST00000448518 926 ntBASIC26.27■■□□□ 1.8
USP17L4A6NCW7 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
USP17L4A6NCW7 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
USP17L4A6NCW7 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
USP17L4A6NCW7 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC26.27■■□□□ 1.8
USP17L4A6NCW7 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
USP17L4A6NCW7 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
USP17L4A6NCW7 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
USP17L4A6NCW7 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
USP17L4A6NCW7 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC26.26■■□□□ 1.79
USP17L4A6NCW7 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
USP17L4A6NCW7 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
USP17L4A6NCW7 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC26.26■■□□□ 1.79
USP17L4A6NCW7 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
USP17L4A6NCW7 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC26.26■■□□□ 1.79
USP17L4A6NCW7 CD99P1-205ENST00000527459 561 ntBASIC26.26■■□□□ 1.79
USP17L4A6NCW7 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC26.26■■□□□ 1.79
USP17L4A6NCW7 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
USP17L4A6NCW7 AC005181.1-201ENST00000604782 1256 ntBASIC26.26■■□□□ 1.79
USP17L4A6NCW7 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
USP17L4A6NCW7 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
USP17L4A6NCW7 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
USP17L4A6NCW7 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
USP17L4A6NCW7 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
USP17L4A6NCW7 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
USP17L4A6NCW7 MFF-207ENST00000409565 1548 ntTSL 2 BASIC26.25■■□□□ 1.79
USP17L4A6NCW7 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC26.25■■□□□ 1.79
USP17L4A6NCW7 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
USP17L4A6NCW7 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
USP17L4A6NCW7 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
USP17L4A6NCW7 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
USP17L4A6NCW7 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC26.25■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms