Protein–RNA interactions for Protein: A6NCK2

TRIM43B, Tripartite motif-containing protein 43B, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43BA6NCK2 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC23.9■■□□□ 1.42
TRIM43BA6NCK2 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC23.9■■□□□ 1.42
TRIM43BA6NCK2 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC23.9■■□□□ 1.42
TRIM43BA6NCK2 MIR4758-201ENST00000577688 71 ntBASIC23.9■■□□□ 1.42
TRIM43BA6NCK2 PXK-203ENST00000383715 1756 ntTSL 5 BASIC23.9■■□□□ 1.42
TRIM43BA6NCK2 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.9■■□□□ 1.42
TRIM43BA6NCK2 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TRIM43BA6NCK2 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TRIM43BA6NCK2 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TRIM43BA6NCK2 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
TRIM43BA6NCK2 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
TRIM43BA6NCK2 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.89■■□□□ 1.42
TRIM43BA6NCK2 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
TRIM43BA6NCK2 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.41
TRIM43BA6NCK2 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC23.89■■□□□ 1.41
TRIM43BA6NCK2 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC23.89■■□□□ 1.41
TRIM43BA6NCK2 AC010536.3-201ENST00000620306 533 ntBASIC23.89■■□□□ 1.41
TRIM43BA6NCK2 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TRIM43BA6NCK2 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TRIM43BA6NCK2 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRIM43BA6NCK2 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRIM43BA6NCK2 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.88■■□□□ 1.41
TRIM43BA6NCK2 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC23.88■■□□□ 1.41
TRIM43BA6NCK2 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRIM43BA6NCK2 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRIM43BA6NCK2 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRIM43BA6NCK2 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC23.88■■□□□ 1.41
TRIM43BA6NCK2 AC098590.1-201ENST00000468126 897 ntBASIC23.88■■□□□ 1.41
TRIM43BA6NCK2 SERP1-208ENST00000491660 830 ntTSL 2 BASIC23.88■■□□□ 1.41
TRIM43BA6NCK2 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC23.88■■□□□ 1.41
TRIM43BA6NCK2 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
TRIM43BA6NCK2 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC23.88■■□□□ 1.41
TRIM43BA6NCK2 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.88■■□□□ 1.41
TRIM43BA6NCK2 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRIM43BA6NCK2 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRIM43BA6NCK2 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRIM43BA6NCK2 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRIM43BA6NCK2 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRIM43BA6NCK2 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
TRIM43BA6NCK2 SLC7A5P1-201ENST00000568957 537 ntBASIC23.87■■□□□ 1.41
TRIM43BA6NCK2 MARS-234ENST00000630571 216 ntTSL 5 BASIC23.87■■□□□ 1.41
TRIM43BA6NCK2 MARS-235ENST00000630803 183 ntTSL 3 BASIC23.87■■□□□ 1.41
TRIM43BA6NCK2 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRIM43BA6NCK2 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRIM43BA6NCK2 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRIM43BA6NCK2 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRIM43BA6NCK2 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRIM43BA6NCK2 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRIM43BA6NCK2 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRIM43BA6NCK2 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC23.86■■□□□ 1.41
TRIM43BA6NCK2 MIPEPP3-201ENST00000412105 444 ntBASIC23.86■■□□□ 1.41
TRIM43BA6NCK2 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC23.86■■□□□ 1.41
TRIM43BA6NCK2 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
TRIM43BA6NCK2 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.86■■□□□ 1.41
TRIM43BA6NCK2 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRIM43BA6NCK2 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
TRIM43BA6NCK2 MFF-207ENST00000409565 1548 ntTSL 2 BASIC23.85■■□□□ 1.41
TRIM43BA6NCK2 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
TRIM43BA6NCK2 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
TRIM43BA6NCK2 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TRIM43BA6NCK2 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TRIM43BA6NCK2 PPP1R14BP2-201ENST00000426284 444 ntBASIC23.85■■□□□ 1.41
TRIM43BA6NCK2 UQCRFS1P1-201ENST00000435169 820 ntBASIC23.85■■□□□ 1.41
TRIM43BA6NCK2 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TRIM43BA6NCK2 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TRIM43BA6NCK2 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TRIM43BA6NCK2 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC23.84■■□□□ 1.41
TRIM43BA6NCK2 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.84■■□□□ 1.41
TRIM43BA6NCK2 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRIM43BA6NCK2 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRIM43BA6NCK2 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRIM43BA6NCK2 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC23.84■■□□□ 1.41
TRIM43BA6NCK2 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC23.84■■□□□ 1.41
TRIM43BA6NCK2 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
TRIM43BA6NCK2 DUSP5P2-201ENST00000426873 1033 ntBASIC23.84■■□□□ 1.41
TRIM43BA6NCK2 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
TRIM43BA6NCK2 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
TRIM43BA6NCK2 AL353803.4-201ENST00000565882 1934 ntBASIC23.83■■□□□ 1.41
TRIM43BA6NCK2 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TRIM43BA6NCK2 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TRIM43BA6NCK2 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TRIM43BA6NCK2 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TRIM43BA6NCK2 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC23.83■■□□□ 1.41
TRIM43BA6NCK2 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.41
TRIM43BA6NCK2 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC23.83■■□□□ 1.41
TRIM43BA6NCK2 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC23.83■■□□□ 1.41
TRIM43BA6NCK2 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TRIM43BA6NCK2 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
TRIM43BA6NCK2 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
TRIM43BA6NCK2 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
TRIM43BA6NCK2 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC23.83■■□□□ 1.4
TRIM43BA6NCK2 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM43BA6NCK2 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM43BA6NCK2 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.82■■□□□ 1.4
TRIM43BA6NCK2 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
TRIM43BA6NCK2 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.82■■□□□ 1.4
TRIM43BA6NCK2 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC23.82■■□□□ 1.4
TRIM43BA6NCK2 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC23.82■■□□□ 1.4
TRIM43BA6NCK2 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC23.82■■□□□ 1.4
TRIM43BA6NCK2 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC23.82■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms