Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNOT1A5YKK6 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.01■□□□□ 0.95
CNOT1A5YKK6 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.01■□□□□ 0.95
CNOT1A5YKK6 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.01■□□□□ 0.95
CNOT1A5YKK6 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.01■□□□□ 0.95
CNOT1A5YKK6 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.01■□□□□ 0.95
CNOT1A5YKK6 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.01■□□□□ 0.95
CNOT1A5YKK6 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNOT1A5YKK6 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
CNOT1A5YKK6 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21■□□□□ 0.95
CNOT1A5YKK6 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21■□□□□ 0.95
CNOT1A5YKK6 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21■□□□□ 0.95
CNOT1A5YKK6 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21■□□□□ 0.95
CNOT1A5YKK6 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21■□□□□ 0.95
CNOT1A5YKK6 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21■□□□□ 0.95
CNOT1A5YKK6 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CNOT1A5YKK6 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CNOT1A5YKK6 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21■□□□□ 0.95
CNOT1A5YKK6 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21■□□□□ 0.95
CNOT1A5YKK6 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CNOT1A5YKK6 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21■□□□□ 0.95
CNOT1A5YKK6 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21■□□□□ 0.95
CNOT1A5YKK6 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CNOT1A5YKK6 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21■□□□□ 0.95
CNOT1A5YKK6 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21■□□□□ 0.95
CNOT1A5YKK6 UQCRFS1P1-201ENST00000435169 820 ntBASIC21■□□□□ 0.95
CNOT1A5YKK6 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21■□□□□ 0.95
CNOT1A5YKK6 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21■□□□□ 0.95
CNOT1A5YKK6 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
CNOT1A5YKK6 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21■□□□□ 0.95
CNOT1A5YKK6 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CNOT1A5YKK6 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CNOT1A5YKK6 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.99■□□□□ 0.95
CNOT1A5YKK6 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CNOT1A5YKK6 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CNOT1A5YKK6 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CNOT1A5YKK6 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CNOT1A5YKK6 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CNOT1A5YKK6 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.99■□□□□ 0.95
CNOT1A5YKK6 AC016405.3-201ENST00000607710 860 ntBASIC20.99■□□□□ 0.95
CNOT1A5YKK6 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CNOT1A5YKK6 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CNOT1A5YKK6 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CNOT1A5YKK6 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.98■□□□□ 0.95
CNOT1A5YKK6 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CNOT1A5YKK6 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CNOT1A5YKK6 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CNOT1A5YKK6 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.98■□□□□ 0.95
CNOT1A5YKK6 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.98■□□□□ 0.95
CNOT1A5YKK6 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CNOT1A5YKK6 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.97■□□□□ 0.95
CNOT1A5YKK6 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CNOT1A5YKK6 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNOT1A5YKK6 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNOT1A5YKK6 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CNOT1A5YKK6 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNOT1A5YKK6 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNOT1A5YKK6 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.97■□□□□ 0.95
CNOT1A5YKK6 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
CNOT1A5YKK6 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
CNOT1A5YKK6 AC026366.1-201ENST00000488803 879 ntBASIC20.96■□□□□ 0.95
CNOT1A5YKK6 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CNOT1A5YKK6 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.96■□□□□ 0.95
CNOT1A5YKK6 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
CNOT1A5YKK6 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CNOT1A5YKK6 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CNOT1A5YKK6 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CNOT1A5YKK6 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNOT1A5YKK6 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CNOT1A5YKK6 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CNOT1A5YKK6 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNOT1A5YKK6 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.95■□□□□ 0.94
CNOT1A5YKK6 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CNOT1A5YKK6 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.95■□□□□ 0.94
CNOT1A5YKK6 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.95■□□□□ 0.94
CNOT1A5YKK6 AC068587.7-201ENST00000641602 218 ntBASIC20.95■□□□□ 0.94
CNOT1A5YKK6 AC009237.3-201ENST00000393279 1427 ntBASIC20.95■□□□□ 0.94
CNOT1A5YKK6 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNOT1A5YKK6 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CNOT1A5YKK6 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNOT1A5YKK6 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNOT1A5YKK6 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNOT1A5YKK6 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.95■□□□□ 0.94
CNOT1A5YKK6 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNOT1A5YKK6 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.95■□□□□ 0.94
CNOT1A5YKK6 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.95■□□□□ 0.94
CNOT1A5YKK6 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CNOT1A5YKK6 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.94■□□□□ 0.94
CNOT1A5YKK6 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNOT1A5YKK6 CYP2T1P-201ENST00000432607 1285 ntBASIC20.94■□□□□ 0.94
CNOT1A5YKK6 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CNOT1A5YKK6 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.94■□□□□ 0.94
CNOT1A5YKK6 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNOT1A5YKK6 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNOT1A5YKK6 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CNOT1A5YKK6 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CNOT1A5YKK6 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CNOT1A5YKK6 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNOT1A5YKK6 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CNOT1A5YKK6 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms