Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
SSC5DA1L4H1 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
SSC5DA1L4H1 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.69
SSC5DA1L4H1 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.69
SSC5DA1L4H1 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
SSC5DA1L4H1 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
SSC5DA1L4H1 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.69
SSC5DA1L4H1 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC25.64■■□□□ 1.69
SSC5DA1L4H1 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.69
SSC5DA1L4H1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SSC5DA1L4H1 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SSC5DA1L4H1 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SSC5DA1L4H1 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SSC5DA1L4H1 PFKL-212ENST00000628044 129 ntTSL 3 BASIC25.63■■□□□ 1.69
SSC5DA1L4H1 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
SSC5DA1L4H1 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
SSC5DA1L4H1 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
SSC5DA1L4H1 AC055733.4-201ENST00000638462 1354 ntBASIC25.63■■□□□ 1.69
SSC5DA1L4H1 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SSC5DA1L4H1 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
SSC5DA1L4H1 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
SSC5DA1L4H1 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SSC5DA1L4H1 SERP1-208ENST00000491660 830 ntTSL 2 BASIC25.62■■□□□ 1.69
SSC5DA1L4H1 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SSC5DA1L4H1 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SSC5DA1L4H1 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC25.61■■□□□ 1.69
SSC5DA1L4H1 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
SSC5DA1L4H1 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SSC5DA1L4H1 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
SSC5DA1L4H1 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SSC5DA1L4H1 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SSC5DA1L4H1 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC25.61■■□□□ 1.69
SSC5DA1L4H1 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SSC5DA1L4H1 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC25.61■■□□□ 1.69
SSC5DA1L4H1 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC25.61■■□□□ 1.69
SSC5DA1L4H1 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SSC5DA1L4H1 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC25.61■■□□□ 1.69
SSC5DA1L4H1 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC25.61■■□□□ 1.69
SSC5DA1L4H1 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC25.61■■□□□ 1.69
SSC5DA1L4H1 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
SSC5DA1L4H1 LINC01124-201ENST00000409786 2117 ntBASIC25.6■■□□□ 1.69
SSC5DA1L4H1 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
SSC5DA1L4H1 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
SSC5DA1L4H1 AC073210.2-201ENST00000430369 194 ntBASIC25.6■■□□□ 1.69
SSC5DA1L4H1 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
SSC5DA1L4H1 AC010141.2-201ENST00000452426 721 ntBASIC25.6■■□□□ 1.69
SSC5DA1L4H1 RGMA-211ENST00000557420 989 ntTSL 3 BASIC25.6■■□□□ 1.69
SSC5DA1L4H1 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC25.6■■□□□ 1.69
SSC5DA1L4H1 AL139125.2-201ENST00000623134 1869 ntBASIC25.6■■□□□ 1.69
SSC5DA1L4H1 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SSC5DA1L4H1 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SSC5DA1L4H1 AC133552.2-202ENST00000575694 574 ntBASIC25.59■■□□□ 1.69
SSC5DA1L4H1 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
SSC5DA1L4H1 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
SSC5DA1L4H1 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SSC5DA1L4H1 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC25.59■■□□□ 1.69
SSC5DA1L4H1 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
SSC5DA1L4H1 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SSC5DA1L4H1 AC020928.2-201ENST00000588717 2197 ntBASIC25.58■■□□□ 1.69
SSC5DA1L4H1 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
SSC5DA1L4H1 AF201337.1-201ENST00000520239 748 ntBASIC25.58■■□□□ 1.69
SSC5DA1L4H1 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC25.58■■□□□ 1.69
SSC5DA1L4H1 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC25.58■■□□□ 1.69
SSC5DA1L4H1 AC008687.6-201ENST00000596318 630 ntBASIC25.58■■□□□ 1.69
SSC5DA1L4H1 AC010536.3-201ENST00000620306 533 ntBASIC25.58■■□□□ 1.69
SSC5DA1L4H1 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC25.58■■□□□ 1.69
SSC5DA1L4H1 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC25.58■■□□□ 1.69
SSC5DA1L4H1 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.68
SSC5DA1L4H1 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC25.57■■□□□ 1.68
SSC5DA1L4H1 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC25.57■■□□□ 1.68
SSC5DA1L4H1 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
SSC5DA1L4H1 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC25.57■■□□□ 1.68
SSC5DA1L4H1 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SSC5DA1L4H1 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
SSC5DA1L4H1 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SSC5DA1L4H1 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SSC5DA1L4H1 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
SSC5DA1L4H1 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
SSC5DA1L4H1 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
SSC5DA1L4H1 AC093827.2-201ENST00000512654 315 ntBASIC25.56■■□□□ 1.68
SSC5DA1L4H1 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC25.56■■□□□ 1.68
SSC5DA1L4H1 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SSC5DA1L4H1 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SSC5DA1L4H1 TBCB-214ENST00000629269 413 ntTSL 5 BASIC25.56■■□□□ 1.68
SSC5DA1L4H1 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
SSC5DA1L4H1 ABCB10P4-201ENST00000566803 2184 ntBASIC25.56■■□□□ 1.68
SSC5DA1L4H1 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC25.56■■□□□ 1.68
SSC5DA1L4H1 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SSC5DA1L4H1 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC25.56■■□□□ 1.68
SSC5DA1L4H1 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SSC5DA1L4H1 AC105036.2-201ENST00000569468 176 ntBASIC25.56■■□□□ 1.68
SSC5DA1L4H1 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
SSC5DA1L4H1 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
SSC5DA1L4H1 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SSC5DA1L4H1 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SSC5DA1L4H1 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SSC5DA1L4H1 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
SSC5DA1L4H1 DET1-205ENST00000558413 583 ntTSL 4 BASIC25.55■■□□□ 1.68
SSC5DA1L4H1 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC25.55■■□□□ 1.68
SSC5DA1L4H1 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC25.55■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms