Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV6-1A0A0K0K1D8 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV6-1A0A0K0K1D8 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV6-1A0A0K0K1D8 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV6-1A0A0K0K1D8 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TRBV6-1A0A0K0K1D8 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV6-1A0A0K0K1D8 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC16.23■□□□□ 0.19
TRBV6-1A0A0K0K1D8 BHLHE23-202ENST00000612929 1109 ntBASIC16.23■□□□□ 0.19
TRBV6-1A0A0K0K1D8 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV6-1A0A0K0K1D8 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
TRBV6-1A0A0K0K1D8 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TRBV6-1A0A0K0K1D8 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV6-1A0A0K0K1D8 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC16.23■□□□□ 0.19
TRBV6-1A0A0K0K1D8 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TRBV6-1A0A0K0K1D8 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV6-1A0A0K0K1D8 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV6-1A0A0K0K1D8 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV6-1A0A0K0K1D8 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV6-1A0A0K0K1D8 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV6-1A0A0K0K1D8 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV6-1A0A0K0K1D8 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV6-1A0A0K0K1D8 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV6-1A0A0K0K1D8 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV6-1A0A0K0K1D8 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV6-1A0A0K0K1D8 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV6-1A0A0K0K1D8 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV6-1A0A0K0K1D8 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC16.22■□□□□ 0.19
TRBV6-1A0A0K0K1D8 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
TRBV6-1A0A0K0K1D8 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV6-1A0A0K0K1D8 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV6-1A0A0K0K1D8 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV6-1A0A0K0K1D8 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV6-1A0A0K0K1D8 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV6-1A0A0K0K1D8 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV6-1A0A0K0K1D8 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC16.21■□□□□ 0.19
TRBV6-1A0A0K0K1D8 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC16.21■□□□□ 0.19
TRBV6-1A0A0K0K1D8 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV6-1A0A0K0K1D8 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV6-1A0A0K0K1D8 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV6-1A0A0K0K1D8 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC16.21■□□□□ 0.19
TRBV6-1A0A0K0K1D8 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV6-1A0A0K0K1D8 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV6-1A0A0K0K1D8 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV6-1A0A0K0K1D8 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC16.21■□□□□ 0.19
TRBV6-1A0A0K0K1D8 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC16.21■□□□□ 0.19
TRBV6-1A0A0K0K1D8 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV6-1A0A0K0K1D8 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRBV6-1A0A0K0K1D8 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRBV6-1A0A0K0K1D8 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC16.21■□□□□ 0.18
TRBV6-1A0A0K0K1D8 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV6-1A0A0K0K1D8 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV6-1A0A0K0K1D8 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC16.2■□□□□ 0.18
TRBV6-1A0A0K0K1D8 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC16.2■□□□□ 0.18
TRBV6-1A0A0K0K1D8 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV6-1A0A0K0K1D8 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC16.2■□□□□ 0.18
TRBV6-1A0A0K0K1D8 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV6-1A0A0K0K1D8 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV6-1A0A0K0K1D8 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV6-1A0A0K0K1D8 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV6-1A0A0K0K1D8 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV6-1A0A0K0K1D8 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV6-1A0A0K0K1D8 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.2■□□□□ 0.18
TRBV6-1A0A0K0K1D8 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV6-1A0A0K0K1D8 MFF-203ENST00000349901 1716 ntTSL 2 BASIC16.19■□□□□ 0.18
TRBV6-1A0A0K0K1D8 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC16.19■□□□□ 0.18
TRBV6-1A0A0K0K1D8 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV6-1A0A0K0K1D8 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
TRBV6-1A0A0K0K1D8 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV6-1A0A0K0K1D8 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV6-1A0A0K0K1D8 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV6-1A0A0K0K1D8 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TRBV6-1A0A0K0K1D8 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV6-1A0A0K0K1D8 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC16.19■□□□□ 0.18
TRBV6-1A0A0K0K1D8 SENP5-202ENST00000419026 973 ntTSL 3 BASIC16.19■□□□□ 0.18
TRBV6-1A0A0K0K1D8 MIR4508-201ENST00000584178 70 ntBASIC16.19■□□□□ 0.18
TRBV6-1A0A0K0K1D8 AC137630.3-201ENST00000607245 391 ntBASIC16.19■□□□□ 0.18
TRBV6-1A0A0K0K1D8 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV6-1A0A0K0K1D8 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV6-1A0A0K0K1D8 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC16.19■□□□□ 0.18
TRBV6-1A0A0K0K1D8 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV6-1A0A0K0K1D8 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC16.19■□□□□ 0.18
TRBV6-1A0A0K0K1D8 AF106564.1-201ENST00000607058 2553 ntBASIC16.19■□□□□ 0.18
TRBV6-1A0A0K0K1D8 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC16.19■□□□□ 0.18
TRBV6-1A0A0K0K1D8 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV6-1A0A0K0K1D8 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV6-1A0A0K0K1D8 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV6-1A0A0K0K1D8 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV6-1A0A0K0K1D8 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC16.18■□□□□ 0.18
TRBV6-1A0A0K0K1D8 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV6-1A0A0K0K1D8 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC16.18■□□□□ 0.18
TRBV6-1A0A0K0K1D8 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV6-1A0A0K0K1D8 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV6-1A0A0K0K1D8 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV6-1A0A0K0K1D8 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.18■□□□□ 0.18
TRBV6-1A0A0K0K1D8 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC16.18■□□□□ 0.18
TRBV6-1A0A0K0K1D8 C17orf82-201ENST00000623772 1530 ntBASIC16.18■□□□□ 0.18
TRBV6-1A0A0K0K1D8 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV6-1A0A0K0K1D8 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV6-1A0A0K0K1D8 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV6-1A0A0K0K1D8 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms