Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC15.53■□□□□ 0.08
TRGV4A0A0C4DH28 GTSE1-AS1-202ENST00000623117 1518 ntBASIC15.53■□□□□ 0.08
TRGV4A0A0C4DH28 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRGV4A0A0C4DH28 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
TRGV4A0A0C4DH28 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRGV4A0A0C4DH28 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRGV4A0A0C4DH28 AL136116.3-201ENST00000402907 1138 ntBASIC15.53■□□□□ 0.08
TRGV4A0A0C4DH28 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC15.53■□□□□ 0.08
TRGV4A0A0C4DH28 MIR3181-201ENST00000578512 73 ntBASIC15.53■□□□□ 0.08
TRGV4A0A0C4DH28 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC15.53■□□□□ 0.08
TRGV4A0A0C4DH28 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC15.53■□□□□ 0.08
TRGV4A0A0C4DH28 MIR4466-201ENST00000606121 54 ntBASIC15.53■□□□□ 0.08
TRGV4A0A0C4DH28 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC15.53■□□□□ 0.08
TRGV4A0A0C4DH28 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRGV4A0A0C4DH28 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC15.53■□□□□ 0.08
TRGV4A0A0C4DH28 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRGV4A0A0C4DH28 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRGV4A0A0C4DH28 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRGV4A0A0C4DH28 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRGV4A0A0C4DH28 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
TRGV4A0A0C4DH28 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRGV4A0A0C4DH28 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
TRGV4A0A0C4DH28 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC15.52■□□□□ 0.08
TRGV4A0A0C4DH28 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC15.52■□□□□ 0.08
TRGV4A0A0C4DH28 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
TRGV4A0A0C4DH28 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRGV4A0A0C4DH28 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRGV4A0A0C4DH28 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRGV4A0A0C4DH28 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
TRGV4A0A0C4DH28 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC15.52■□□□□ 0.08
TRGV4A0A0C4DH28 PTCHD3P2-201ENST00000424937 1205 ntBASIC15.52■□□□□ 0.08
TRGV4A0A0C4DH28 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC15.52■□□□□ 0.08
TRGV4A0A0C4DH28 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
TRGV4A0A0C4DH28 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
TRGV4A0A0C4DH28 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TRGV4A0A0C4DH28 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TRGV4A0A0C4DH28 AC079834.2-201ENST00000609776 1949 ntBASIC15.52■□□□□ 0.07
TRGV4A0A0C4DH28 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRGV4A0A0C4DH28 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRGV4A0A0C4DH28 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
TRGV4A0A0C4DH28 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRGV4A0A0C4DH28 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRGV4A0A0C4DH28 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRGV4A0A0C4DH28 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRGV4A0A0C4DH28 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRGV4A0A0C4DH28 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC15.51■□□□□ 0.07
TRGV4A0A0C4DH28 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRGV4A0A0C4DH28 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC15.51■□□□□ 0.07
TRGV4A0A0C4DH28 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRGV4A0A0C4DH28 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRGV4A0A0C4DH28 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRGV4A0A0C4DH28 AC087742.1-201ENST00000575880 1738 ntBASIC15.51■□□□□ 0.07
TRGV4A0A0C4DH28 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRGV4A0A0C4DH28 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TRGV4A0A0C4DH28 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TRGV4A0A0C4DH28 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC15.51■□□□□ 0.07
TRGV4A0A0C4DH28 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRGV4A0A0C4DH28 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TRGV4A0A0C4DH28 AC008406.3-201ENST00000620001 1374 ntBASIC15.5■□□□□ 0.07
TRGV4A0A0C4DH28 STX6-204ENST00000542060 4809 ntTSL 2 BASIC15.5■□□□□ 0.07
TRGV4A0A0C4DH28 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRGV4A0A0C4DH28 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TRGV4A0A0C4DH28 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC15.5■□□□□ 0.07
TRGV4A0A0C4DH28 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
TRGV4A0A0C4DH28 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRGV4A0A0C4DH28 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC15.5■□□□□ 0.07
TRGV4A0A0C4DH28 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRGV4A0A0C4DH28 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC15.5■□□□□ 0.07
TRGV4A0A0C4DH28 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
TRGV4A0A0C4DH28 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRGV4A0A0C4DH28 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRGV4A0A0C4DH28 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
TRGV4A0A0C4DH28 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRGV4A0A0C4DH28 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRGV4A0A0C4DH28 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRGV4A0A0C4DH28 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRGV4A0A0C4DH28 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRGV4A0A0C4DH28 ECEL1P1-201ENST00000373592 1742 ntBASIC15.49■□□□□ 0.07
TRGV4A0A0C4DH28 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
TRGV4A0A0C4DH28 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TRGV4A0A0C4DH28 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRGV4A0A0C4DH28 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRGV4A0A0C4DH28 HES6-206ENST00000409574 738 ntTSL 2 BASIC15.49■□□□□ 0.07
TRGV4A0A0C4DH28 AL138724.1-201ENST00000606771 1088 ntBASIC15.49■□□□□ 0.07
TRGV4A0A0C4DH28 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
TRGV4A0A0C4DH28 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRGV4A0A0C4DH28 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRGV4A0A0C4DH28 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRGV4A0A0C4DH28 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRGV4A0A0C4DH28 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRGV4A0A0C4DH28 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC15.49■□□□□ 0.07
TRGV4A0A0C4DH28 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRGV4A0A0C4DH28 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRGV4A0A0C4DH28 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRGV4A0A0C4DH28 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
TRGV4A0A0C4DH28 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC15.48■□□□□ 0.07
TRGV4A0A0C4DH28 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC15.48■□□□□ 0.07
TRGV4A0A0C4DH28 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC15.48■□□□□ 0.07
TRGV4A0A0C4DH28 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC15.48■□□□□ 0.07
TRGV4A0A0C4DH28 AC087239.1-201ENST00000622671 572 ntBASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms