Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV12-3A0A0B4J271 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TRAV12-3A0A0B4J271 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAV12-3A0A0B4J271 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV12-3A0A0B4J271 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV12-3A0A0B4J271 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV12-3A0A0B4J271 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV12-3A0A0B4J271 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC16.09■□□□□ 0.17
TRAV12-3A0A0B4J271 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV12-3A0A0B4J271 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV12-3A0A0B4J271 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV12-3A0A0B4J271 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV12-3A0A0B4J271 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV12-3A0A0B4J271 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC16.09■□□□□ 0.17
TRAV12-3A0A0B4J271 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC16.09■□□□□ 0.17
TRAV12-3A0A0B4J271 AL499627.2-201ENST00000606283 725 ntBASIC16.09■□□□□ 0.17
TRAV12-3A0A0B4J271 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV12-3A0A0B4J271 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.09■□□□□ 0.17
TRAV12-3A0A0B4J271 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV12-3A0A0B4J271 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV12-3A0A0B4J271 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV12-3A0A0B4J271 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV12-3A0A0B4J271 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV12-3A0A0B4J271 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
TRAV12-3A0A0B4J271 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV12-3A0A0B4J271 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.08■□□□□ 0.16
TRAV12-3A0A0B4J271 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV12-3A0A0B4J271 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
TRAV12-3A0A0B4J271 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC16.08■□□□□ 0.16
TRAV12-3A0A0B4J271 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV12-3A0A0B4J271 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV12-3A0A0B4J271 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV12-3A0A0B4J271 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV12-3A0A0B4J271 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV12-3A0A0B4J271 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
TRAV12-3A0A0B4J271 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV12-3A0A0B4J271 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC16.08■□□□□ 0.16
TRAV12-3A0A0B4J271 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
TRAV12-3A0A0B4J271 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
TRAV12-3A0A0B4J271 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC16.07■□□□□ 0.16
TRAV12-3A0A0B4J271 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAV12-3A0A0B4J271 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV12-3A0A0B4J271 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TRAV12-3A0A0B4J271 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV12-3A0A0B4J271 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV12-3A0A0B4J271 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV12-3A0A0B4J271 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC16.07■□□□□ 0.16
TRAV12-3A0A0B4J271 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC16.07■□□□□ 0.16
TRAV12-3A0A0B4J271 AC099791.2-201ENST00000605725 427 ntBASIC16.07■□□□□ 0.16
TRAV12-3A0A0B4J271 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC16.07■□□□□ 0.16
TRAV12-3A0A0B4J271 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC16.07■□□□□ 0.16
TRAV12-3A0A0B4J271 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC16.07■□□□□ 0.16
TRAV12-3A0A0B4J271 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAV12-3A0A0B4J271 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC16.07■□□□□ 0.16
TRAV12-3A0A0B4J271 AC137767.1-201ENST00000602918 1920 ntBASIC16.07■□□□□ 0.16
TRAV12-3A0A0B4J271 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAV12-3A0A0B4J271 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV12-3A0A0B4J271 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TRAV12-3A0A0B4J271 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.07■□□□□ 0.16
TRAV12-3A0A0B4J271 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV12-3A0A0B4J271 FBXW4P1-201ENST00000426721 2239 ntBASIC16.06■□□□□ 0.16
TRAV12-3A0A0B4J271 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV12-3A0A0B4J271 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV12-3A0A0B4J271 BID-212ENST00000614949 1988 ntTSL 5 BASIC16.06■□□□□ 0.16
TRAV12-3A0A0B4J271 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV12-3A0A0B4J271 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV12-3A0A0B4J271 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC16.06■□□□□ 0.16
TRAV12-3A0A0B4J271 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
TRAV12-3A0A0B4J271 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV12-3A0A0B4J271 AC006455.2-201ENST00000429931 906 ntBASIC16.06■□□□□ 0.16
TRAV12-3A0A0B4J271 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAV12-3A0A0B4J271 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC16.06■□□□□ 0.16
TRAV12-3A0A0B4J271 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC16.06■□□□□ 0.16
TRAV12-3A0A0B4J271 pRNA.6-201ENST00000610482 90 ntBASIC16.06■□□□□ 0.16
TRAV12-3A0A0B4J271 pRNA.5-201ENST00000612139 90 ntBASIC16.06■□□□□ 0.16
TRAV12-3A0A0B4J271 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAV12-3A0A0B4J271 pRNA.11-201ENST00000618423 90 ntBASIC16.06■□□□□ 0.16
TRAV12-3A0A0B4J271 pRNA.13-201ENST00000619112 90 ntBASIC16.06■□□□□ 0.16
TRAV12-3A0A0B4J271 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
TRAV12-3A0A0B4J271 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV12-3A0A0B4J271 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TRAV12-3A0A0B4J271 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TRAV12-3A0A0B4J271 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV12-3A0A0B4J271 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV12-3A0A0B4J271 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV12-3A0A0B4J271 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV12-3A0A0B4J271 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TRAV12-3A0A0B4J271 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV12-3A0A0B4J271 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAV12-3A0A0B4J271 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV12-3A0A0B4J271 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
TRAV12-3A0A0B4J271 MIR3621-201ENST00000580529 85 ntBASIC16.05■□□□□ 0.16
TRAV12-3A0A0B4J271 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
TRAV12-3A0A0B4J271 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV12-3A0A0B4J271 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV12-3A0A0B4J271 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV12-3A0A0B4J271 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TRAV12-3A0A0B4J271 GTSE1-AS1-202ENST00000623117 1518 ntBASIC16.04■□□□□ 0.16
TRAV12-3A0A0B4J271 AC133637.1-201ENST00000624115 1537 ntBASIC16.04■□□□□ 0.16
TRAV12-3A0A0B4J271 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms