Protein–RNA interactions for Protein: A0A075B6T6

TRAV12-2, T-cell receptor alpha variable 12-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-2A0A075B6T6 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV12-2A0A075B6T6 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV12-2A0A075B6T6 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC16.08■□□□□ 0.16
TRAV12-2A0A075B6T6 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV12-2A0A075B6T6 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC16.08■□□□□ 0.16
TRAV12-2A0A075B6T6 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV12-2A0A075B6T6 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV12-2A0A075B6T6 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV12-2A0A075B6T6 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV12-2A0A075B6T6 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV12-2A0A075B6T6 PTCHD3P2-201ENST00000424937 1205 ntBASIC16.07■□□□□ 0.16
TRAV12-2A0A075B6T6 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC16.07■□□□□ 0.16
TRAV12-2A0A075B6T6 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC16.07■□□□□ 0.16
TRAV12-2A0A075B6T6 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAV12-2A0A075B6T6 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV12-2A0A075B6T6 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAV12-2A0A075B6T6 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
TRAV12-2A0A075B6T6 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV12-2A0A075B6T6 SYT6-210ENST00000641643 1587 ntBASIC16.07■□□□□ 0.16
TRAV12-2A0A075B6T6 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TRAV12-2A0A075B6T6 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
TRAV12-2A0A075B6T6 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV12-2A0A075B6T6 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC16.07■□□□□ 0.16
TRAV12-2A0A075B6T6 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV12-2A0A075B6T6 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TRAV12-2A0A075B6T6 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV12-2A0A075B6T6 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TRAV12-2A0A075B6T6 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV12-2A0A075B6T6 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV12-2A0A075B6T6 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC16.06■□□□□ 0.16
TRAV12-2A0A075B6T6 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAV12-2A0A075B6T6 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV12-2A0A075B6T6 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC16.06■□□□□ 0.16
TRAV12-2A0A075B6T6 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV12-2A0A075B6T6 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
TRAV12-2A0A075B6T6 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV12-2A0A075B6T6 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAV12-2A0A075B6T6 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV12-2A0A075B6T6 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV12-2A0A075B6T6 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV12-2A0A075B6T6 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAV12-2A0A075B6T6 AL136116.3-201ENST00000402907 1138 ntBASIC16.06■□□□□ 0.16
TRAV12-2A0A075B6T6 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC16.06■□□□□ 0.16
TRAV12-2A0A075B6T6 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV12-2A0A075B6T6 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TRAV12-2A0A075B6T6 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV12-2A0A075B6T6 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TRAV12-2A0A075B6T6 C11orf96-202ENST00000528572 1834 ntBASIC16.05■□□□□ 0.16
TRAV12-2A0A075B6T6 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV12-2A0A075B6T6 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TRAV12-2A0A075B6T6 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
TRAV12-2A0A075B6T6 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV12-2A0A075B6T6 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV12-2A0A075B6T6 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV12-2A0A075B6T6 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TRAV12-2A0A075B6T6 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV12-2A0A075B6T6 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV12-2A0A075B6T6 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
TRAV12-2A0A075B6T6 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV12-2A0A075B6T6 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAV12-2A0A075B6T6 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV12-2A0A075B6T6 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV12-2A0A075B6T6 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV12-2A0A075B6T6 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TRAV12-2A0A075B6T6 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV12-2A0A075B6T6 SERBP1P1-201ENST00000396021 1160 ntBASIC16.05■□□□□ 0.16
TRAV12-2A0A075B6T6 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV12-2A0A075B6T6 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV12-2A0A075B6T6 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV12-2A0A075B6T6 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV12-2A0A075B6T6 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TRAV12-2A0A075B6T6 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAV12-2A0A075B6T6 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV12-2A0A075B6T6 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV12-2A0A075B6T6 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV12-2A0A075B6T6 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV12-2A0A075B6T6 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TRAV12-2A0A075B6T6 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV12-2A0A075B6T6 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAV12-2A0A075B6T6 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAV12-2A0A075B6T6 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAV12-2A0A075B6T6 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAV12-2A0A075B6T6 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV12-2A0A075B6T6 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TRAV12-2A0A075B6T6 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV12-2A0A075B6T6 WWC2-AS2-201ENST00000578387 2183 ntBASIC16.04■□□□□ 0.16
TRAV12-2A0A075B6T6 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV12-2A0A075B6T6 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV12-2A0A075B6T6 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
TRAV12-2A0A075B6T6 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV12-2A0A075B6T6 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
TRAV12-2A0A075B6T6 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAV12-2A0A075B6T6 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
TRAV12-2A0A075B6T6 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV12-2A0A075B6T6 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV12-2A0A075B6T6 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
TRAV12-2A0A075B6T6 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV12-2A0A075B6T6 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV12-2A0A075B6T6 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV12-2A0A075B6T6 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms