Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 LINC00877-202ENST00000464271 552 ntTSL 4 BASIC11.4□□□□□ -0.58
P04436 JPT1-205ENST00000470924 663 ntTSL 5 BASIC11.4□□□□□ -0.58
P04436 APTX-220ENST00000476858 1068 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
P04436 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC11.4□□□□□ -0.58
P04436 AC005355.1-201ENST00000513329 714 ntTSL 3 BASIC11.4□□□□□ -0.58
P04436 WISP1-204ENST00000517423 716 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
P04436 VEGFA-218ENST00000518689 630 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
P04436 AACSP1-202ENST00000521412 1095 ntBASIC11.4□□□□□ -0.58
P04436 VEGFA-223ENST00000523125 541 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
P04436 AP006437.2-201ENST00000528000 345 ntTSL 3 BASIC11.4□□□□□ -0.58
P04436 TBX5-AS1-202ENST00000531024 766 ntTSL 3 BASIC11.4□□□□□ -0.58
P04436 MIR4309-201ENST00000582498 83 ntBASIC11.4□□□□□ -0.58
P04436 AC011479.2-201ENST00000598146 432 ntTSL 3 BASIC11.4□□□□□ -0.58
P04436 KCNQ1OT1_1.1-201ENST00000622358 464 ntBASIC11.4□□□□□ -0.58
P04436 KDM3A-216ENST00000542128 4311 ntTSL 5 BASIC11.4□□□□□ -0.58
P04436 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC11.4□□□□□ -0.58
P04436 MPP4-203ENST00000396886 2250 ntTSL 2 BASIC11.4□□□□□ -0.58
P04436 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC11.4□□□□□ -0.58
P04436 AC020912.1-201ENST00000638312 5059 ntTSL 5 BASIC11.4□□□□□ -0.58
P04436 MSANTD4-201ENST00000301919 4087 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P04436 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC11.4□□□□□ -0.58
P04436 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
P04436 POLR2J2-203ENST00000476151 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P04436 MTERF2-207ENST00000552029 3235 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P04436 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P04436 PTPN6-201ENST00000318974 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P04436 UBTF-206ENST00000527034 3010 ntTSL 5 BASIC11.4□□□□□ -0.58
P04436 MAMLD1-201ENST00000262858 4607 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.59
P04436 SPACA6P-AS-201ENST00000602324 3962 ntTSL 2 BASIC11.4□□□□□ -0.59
P04436 RPL27A-201ENST00000314138 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
P04436 TTC17-202ENST00000299240 3648 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
P04436 KCNAB1-215ENST00000618897 4437 ntTSL 5 BASIC11.4□□□□□ -0.59
P04436 TBC1D22A-203ENST00000380995 3934 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
P04436 CDX2-201ENST00000381020 4053 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
P04436 MAST4-202ENST00000403625 10711 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
P04436 JAML-201ENST00000292067 1959 ntAPPRIS P3 TSL 2 BASIC11.39□□□□□ -0.59
P04436 ETNK1-201ENST00000266517 7159 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P04436 RPL4P6-201ENST00000438116 1304 ntBASIC11.39□□□□□ -0.59
P04436 TLR8-AS1-201ENST00000451564 1349 ntTSL 5 BASIC11.39□□□□□ -0.59
P04436 YY2-201ENST00000429584 2741 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
P04436 AC090952.2-201ENST00000635800 1620 ntTSL 5 BASIC11.39□□□□□ -0.59
P04436 PAPLN-203ENST00000554301 4090 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
P04436 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC11.39□□□□□ -0.59
P04436 AR-201ENST00000374690 10652 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P04436 L3MBTL3-207ENST00000529410 4518 ntAPPRIS P4 TSL 5 BASIC11.39□□□□□ -0.59
P04436 ITFG2-201ENST00000228799 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P04436 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC11.39□□□□□ -0.59
P04436 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
P04436 NRAP-203ENST00000369358 5534 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P04436 NANP-201ENST00000304788 3964 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P04436 PCP2-201ENST00000311069 776 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
P04436 TESK2-202ENST00000372086 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P04436 APTX-206ENST00000379825 2023 ntTSL 2 BASIC11.39□□□□□ -0.59
P04436 IFITM2-202ENST00000399817 659 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
P04436 APOBEC3B-204ENST00000407298 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
P04436 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P04436 AL357055.2-201ENST00000412567 434 ntBASIC11.39□□□□□ -0.59
P04436 AL353616.2-201ENST00000413269 1739 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
P04436 HLA-U-204ENST00000418981 186 ntBASIC11.39□□□□□ -0.59
P04436 AL590399.1-204ENST00000430302 781 ntTSL 5 BASIC11.39□□□□□ -0.59
P04436 AL121972.2-201ENST00000431108 556 ntTSL 4 BASIC11.39□□□□□ -0.59
P04436 DDX56-204ENST00000431640 1554 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
P04436 LINC01824-201ENST00000436082 528 ntTSL 4 BASIC11.39□□□□□ -0.59
P04436 KIAA1549-202ENST00000440172 12379 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
P04436 AC010900.1-201ENST00000449849 1296 ntBASIC11.39□□□□□ -0.59
P04436 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
P04436 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P04436 AC067942.2-201ENST00000506227 1268 ntBASIC11.39□□□□□ -0.59
P04436 AC124242.1-203ENST00000517747 817 ntTSL 3 BASIC11.39□□□□□ -0.59
P04436 TTI2-204ENST00000520636 1588 ntTSL 5 BASIC11.39□□□□□ -0.59
P04436 LMO3-228ENST00000541846 573 ntAPPRIS P1 TSL 4 BASIC11.39□□□□□ -0.59
P04436 AP002383.2-201ENST00000545768 675 ntBASIC11.39□□□□□ -0.59
P04436 AC073655.1-201ENST00000550111 493 ntTSL 3 BASIC11.39□□□□□ -0.59
P04436 TTC39A-AS1-201ENST00000564479 812 ntTSL 3 BASIC11.39□□□□□ -0.59
P04436 BMS1P8-203ENST00000567036 614 ntTSL 3 BASIC11.39□□□□□ -0.59
P04436 IGHV2OR16-5-201ENST00000567458 358 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
P04436 TRAP1-212ENST00000575671 2309 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
P04436 AC021594.2-201ENST00000592499 527 ntTSL 3 BASIC11.39□□□□□ -0.59
P04436 PDE4C-213ENST00000598111 1284 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
P04436 SIGLEC21P-201ENST00000598990 1010 ntBASIC11.39□□□□□ -0.59
P04436 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC11.39□□□□□ -0.59
P04436 AC105020.5-201ENST00000614810 423 ntBASIC11.39□□□□□ -0.59
P04436 MRPL45-204ENST00000619548 1554 ntTSL 3 BASIC11.39□□□□□ -0.59
P04436 CR392039.1-201ENST00000623217 204 ntBASIC11.39□□□□□ -0.59
P04436 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P04436 BOC-215ENST00000495514 4646 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
P04436 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
P04436 PATJ-215ENST00000635137 2298 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
P04436 SLC17A9-202ENST00000370351 3580 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
P04436 PCDHA9-201ENST00000378122 6900 ntBASIC11.39□□□□□ -0.59
P04436 PMS2CL-202ENST00000403974 1529 ntBASIC11.39□□□□□ -0.59
P04436 DLGAP2-214ENST00000612087 10088 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
P04436 AC241952.1-201ENST00000612480 6897 ntBASIC11.39□□□□□ -0.59
P04436 AL512383.1-201ENST00000624175 2677 ntBASIC11.39□□□□□ -0.59
P04436 BHMT-201ENST00000274353 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P04436 GUCY2D-201ENST00000254854 3698 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P04436 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
P04436 GNG7-201ENST00000382159 4208 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P04436 DNAJB14-205ENST00000442697 6075 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P04436 CA10-202ENST00000442502 2935 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms