Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
AP4S1Q9Y587 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.52■□□□□ 0.88
AP4S1Q9Y587 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.52■□□□□ 0.88
AP4S1Q9Y587 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
AP4S1Q9Y587 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
AP4S1Q9Y587 AL592293.1-201ENST00000502889 1188 ntBASIC20.52■□□□□ 0.88
AP4S1Q9Y587 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.52■□□□□ 0.88
AP4S1Q9Y587 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
AP4S1Q9Y587 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
AP4S1Q9Y587 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
AP4S1Q9Y587 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
AP4S1Q9Y587 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
AP4S1Q9Y587 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
AP4S1Q9Y587 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
AP4S1Q9Y587 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
AP4S1Q9Y587 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
AP4S1Q9Y587 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
AP4S1Q9Y587 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
AP4S1Q9Y587 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
AP4S1Q9Y587 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
AP4S1Q9Y587 GPX1-201ENST00000419349 1106 ntBASIC20.51■□□□□ 0.87
AP4S1Q9Y587 AC004448.1-201ENST00000458332 883 ntBASIC20.51■□□□□ 0.87
AP4S1Q9Y587 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
AP4S1Q9Y587 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
AP4S1Q9Y587 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
AP4S1Q9Y587 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
AP4S1Q9Y587 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
AP4S1Q9Y587 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
AP4S1Q9Y587 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
AP4S1Q9Y587 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.5■□□□□ 0.87
AP4S1Q9Y587 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
AP4S1Q9Y587 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
AP4S1Q9Y587 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
AP4S1Q9Y587 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
AP4S1Q9Y587 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
AP4S1Q9Y587 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
AP4S1Q9Y587 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
AP4S1Q9Y587 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
AP4S1Q9Y587 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.5■□□□□ 0.87
AP4S1Q9Y587 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
AP4S1Q9Y587 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
AP4S1Q9Y587 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
AP4S1Q9Y587 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.49■□□□□ 0.87
AP4S1Q9Y587 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.49■□□□□ 0.87
AP4S1Q9Y587 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.49■□□□□ 0.87
AP4S1Q9Y587 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.49■□□□□ 0.87
AP4S1Q9Y587 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.49■□□□□ 0.87
AP4S1Q9Y587 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
AP4S1Q9Y587 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
AP4S1Q9Y587 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.49■□□□□ 0.87
AP4S1Q9Y587 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
AP4S1Q9Y587 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
AP4S1Q9Y587 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
AP4S1Q9Y587 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
AP4S1Q9Y587 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
AP4S1Q9Y587 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
AP4S1Q9Y587 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.48■□□□□ 0.87
AP4S1Q9Y587 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
AP4S1Q9Y587 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
AP4S1Q9Y587 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
AP4S1Q9Y587 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.48■□□□□ 0.87
AP4S1Q9Y587 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
AP4S1Q9Y587 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
AP4S1Q9Y587 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
AP4S1Q9Y587 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
AP4S1Q9Y587 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.48■□□□□ 0.87
AP4S1Q9Y587 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
AP4S1Q9Y587 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
AP4S1Q9Y587 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.48■□□□□ 0.87
AP4S1Q9Y587 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.48■□□□□ 0.87
AP4S1Q9Y587 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
AP4S1Q9Y587 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
AP4S1Q9Y587 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.47■□□□□ 0.87
AP4S1Q9Y587 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
AP4S1Q9Y587 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
AP4S1Q9Y587 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
AP4S1Q9Y587 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
AP4S1Q9Y587 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
AP4S1Q9Y587 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
AP4S1Q9Y587 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.47■□□□□ 0.87
AP4S1Q9Y587 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
AP4S1Q9Y587 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
AP4S1Q9Y587 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
AP4S1Q9Y587 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.47■□□□□ 0.87
AP4S1Q9Y587 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
AP4S1Q9Y587 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
AP4S1Q9Y587 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
AP4S1Q9Y587 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
AP4S1Q9Y587 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
AP4S1Q9Y587 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
AP4S1Q9Y587 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
AP4S1Q9Y587 DUX4L9-201ENST00000449051 1259 ntBASIC20.46■□□□□ 0.87
AP4S1Q9Y587 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
AP4S1Q9Y587 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
AP4S1Q9Y587 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
AP4S1Q9Y587 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
AP4S1Q9Y587 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
AP4S1Q9Y587 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
AP4S1Q9Y587 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
AP4S1Q9Y587 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms