Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF11Q9Y3C5 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RNF11Q9Y3C5 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.19■□□□□ 0.98
RNF11Q9Y3C5 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.19■□□□□ 0.98
RNF11Q9Y3C5 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF11Q9Y3C5 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
RNF11Q9Y3C5 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.19■□□□□ 0.98
RNF11Q9Y3C5 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF11Q9Y3C5 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF11Q9Y3C5 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF11Q9Y3C5 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
RNF11Q9Y3C5 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF11Q9Y3C5 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF11Q9Y3C5 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
RNF11Q9Y3C5 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
RNF11Q9Y3C5 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.18■□□□□ 0.98
RNF11Q9Y3C5 pRNA.6-201ENST00000610482 90 ntBASIC21.18■□□□□ 0.98
RNF11Q9Y3C5 pRNA.5-201ENST00000612139 90 ntBASIC21.18■□□□□ 0.98
RNF11Q9Y3C5 pRNA.11-201ENST00000618423 90 ntBASIC21.18■□□□□ 0.98
RNF11Q9Y3C5 pRNA.13-201ENST00000619112 90 ntBASIC21.18■□□□□ 0.98
RNF11Q9Y3C5 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.18■□□□□ 0.98
RNF11Q9Y3C5 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF11Q9Y3C5 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.18■□□□□ 0.98
RNF11Q9Y3C5 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF11Q9Y3C5 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF11Q9Y3C5 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF11Q9Y3C5 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF11Q9Y3C5 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF11Q9Y3C5 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF11Q9Y3C5 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
RNF11Q9Y3C5 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RNF11Q9Y3C5 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RNF11Q9Y3C5 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.17■□□□□ 0.98
RNF11Q9Y3C5 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RNF11Q9Y3C5 AL512631.2-201ENST00000604634 923 ntBASIC21.17■□□□□ 0.98
RNF11Q9Y3C5 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RNF11Q9Y3C5 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.17■□□□□ 0.98
RNF11Q9Y3C5 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF11Q9Y3C5 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
RNF11Q9Y3C5 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
RNF11Q9Y3C5 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
RNF11Q9Y3C5 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF11Q9Y3C5 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.16■□□□□ 0.98
RNF11Q9Y3C5 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF11Q9Y3C5 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF11Q9Y3C5 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF11Q9Y3C5 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF11Q9Y3C5 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNF11Q9Y3C5 C11orf96-202ENST00000528572 1834 ntBASIC21.15■□□□□ 0.98
RNF11Q9Y3C5 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
RNF11Q9Y3C5 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF11Q9Y3C5 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF11Q9Y3C5 AC133637.1-201ENST00000624115 1537 ntBASIC21.15■□□□□ 0.98
RNF11Q9Y3C5 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
RNF11Q9Y3C5 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RNF11Q9Y3C5 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RNF11Q9Y3C5 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.15■□□□□ 0.98
RNF11Q9Y3C5 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RNF11Q9Y3C5 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
RNF11Q9Y3C5 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.15■□□□□ 0.98
RNF11Q9Y3C5 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF11Q9Y3C5 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.15■□□□□ 0.98
RNF11Q9Y3C5 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RNF11Q9Y3C5 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
RNF11Q9Y3C5 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RNF11Q9Y3C5 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.14■□□□□ 0.98
RNF11Q9Y3C5 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RNF11Q9Y3C5 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.14■□□□□ 0.98
RNF11Q9Y3C5 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
RNF11Q9Y3C5 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.14■□□□□ 0.98
RNF11Q9Y3C5 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.14■□□□□ 0.97
RNF11Q9Y3C5 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF11Q9Y3C5 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF11Q9Y3C5 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF11Q9Y3C5 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF11Q9Y3C5 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RNF11Q9Y3C5 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.14■□□□□ 0.97
RNF11Q9Y3C5 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
RNF11Q9Y3C5 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
RNF11Q9Y3C5 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.14■□□□□ 0.97
RNF11Q9Y3C5 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.14■□□□□ 0.97
RNF11Q9Y3C5 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RNF11Q9Y3C5 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RNF11Q9Y3C5 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RNF11Q9Y3C5 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.13■□□□□ 0.97
RNF11Q9Y3C5 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RNF11Q9Y3C5 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RNF11Q9Y3C5 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RNF11Q9Y3C5 SRD5A1P1-201ENST00000442297 786 ntBASIC21.13■□□□□ 0.97
RNF11Q9Y3C5 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.13■□□□□ 0.97
RNF11Q9Y3C5 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
RNF11Q9Y3C5 CA15P2-201ENST00000611168 834 ntBASIC21.13■□□□□ 0.97
RNF11Q9Y3C5 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF11Q9Y3C5 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
RNF11Q9Y3C5 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF11Q9Y3C5 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
RNF11Q9Y3C5 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF11Q9Y3C5 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
RNF11Q9Y3C5 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.12■□□□□ 0.97
RNF11Q9Y3C5 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms