Protein–RNA interactions for Protein: Q9Y3B2

EXOSC1, Exosome complex component CSL4, humanhuman

Known RBP Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1Q9Y3B2 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.44■□□□□ 0.7
EXOSC1Q9Y3B2 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
EXOSC1Q9Y3B2 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.44■□□□□ 0.7
EXOSC1Q9Y3B2 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.44■□□□□ 0.7
EXOSC1Q9Y3B2 DUX4L4-201ENST00000566884 1269 ntBASIC19.44■□□□□ 0.7
EXOSC1Q9Y3B2 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.44■□□□□ 0.7
EXOSC1Q9Y3B2 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
EXOSC1Q9Y3B2 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
EXOSC1Q9Y3B2 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
EXOSC1Q9Y3B2 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.44■□□□□ 0.7
EXOSC1Q9Y3B2 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.43■□□□□ 0.7
EXOSC1Q9Y3B2 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
EXOSC1Q9Y3B2 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
EXOSC1Q9Y3B2 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
EXOSC1Q9Y3B2 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.43■□□□□ 0.7
EXOSC1Q9Y3B2 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
EXOSC1Q9Y3B2 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.43■□□□□ 0.7
EXOSC1Q9Y3B2 DUX4L18-201ENST00000553347 1267 ntBASIC19.43■□□□□ 0.7
EXOSC1Q9Y3B2 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
EXOSC1Q9Y3B2 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EXOSC1Q9Y3B2 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EXOSC1Q9Y3B2 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
EXOSC1Q9Y3B2 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
EXOSC1Q9Y3B2 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EXOSC1Q9Y3B2 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.42■□□□□ 0.7
EXOSC1Q9Y3B2 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
EXOSC1Q9Y3B2 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EXOSC1Q9Y3B2 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
EXOSC1Q9Y3B2 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EXOSC1Q9Y3B2 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EXOSC1Q9Y3B2 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EXOSC1Q9Y3B2 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
EXOSC1Q9Y3B2 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
EXOSC1Q9Y3B2 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.42■□□□□ 0.7
EXOSC1Q9Y3B2 AC074183.2-201ENST00000623112 922 ntBASIC19.42■□□□□ 0.7
EXOSC1Q9Y3B2 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
EXOSC1Q9Y3B2 Z98882.1-201ENST00000622160 2253 ntBASIC19.42■□□□□ 0.7
EXOSC1Q9Y3B2 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
EXOSC1Q9Y3B2 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EXOSC1Q9Y3B2 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.42■□□□□ 0.7
EXOSC1Q9Y3B2 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
EXOSC1Q9Y3B2 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
EXOSC1Q9Y3B2 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.41■□□□□ 0.7
EXOSC1Q9Y3B2 AC073130.3-201ENST00000624389 2278 ntBASIC19.41■□□□□ 0.7
EXOSC1Q9Y3B2 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
EXOSC1Q9Y3B2 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EXOSC1Q9Y3B2 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EXOSC1Q9Y3B2 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EXOSC1Q9Y3B2 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
EXOSC1Q9Y3B2 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EXOSC1Q9Y3B2 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EXOSC1Q9Y3B2 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.41■□□□□ 0.7
EXOSC1Q9Y3B2 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.41■□□□□ 0.7
EXOSC1Q9Y3B2 BHLHE23-202ENST00000612929 1109 ntBASIC19.41■□□□□ 0.7
EXOSC1Q9Y3B2 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.41■□□□□ 0.7
EXOSC1Q9Y3B2 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
EXOSC1Q9Y3B2 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
EXOSC1Q9Y3B2 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.4■□□□□ 0.7
EXOSC1Q9Y3B2 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EXOSC1Q9Y3B2 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.4■□□□□ 0.7
EXOSC1Q9Y3B2 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
EXOSC1Q9Y3B2 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
EXOSC1Q9Y3B2 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EXOSC1Q9Y3B2 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EXOSC1Q9Y3B2 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
EXOSC1Q9Y3B2 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EXOSC1Q9Y3B2 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.4■□□□□ 0.7
EXOSC1Q9Y3B2 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.4■□□□□ 0.7
EXOSC1Q9Y3B2 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EXOSC1Q9Y3B2 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
EXOSC1Q9Y3B2 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
EXOSC1Q9Y3B2 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.4■□□□□ 0.7
EXOSC1Q9Y3B2 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EXOSC1Q9Y3B2 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
EXOSC1Q9Y3B2 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.39■□□□□ 0.7
EXOSC1Q9Y3B2 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
EXOSC1Q9Y3B2 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
EXOSC1Q9Y3B2 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
EXOSC1Q9Y3B2 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.39■□□□□ 0.69
EXOSC1Q9Y3B2 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
EXOSC1Q9Y3B2 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
EXOSC1Q9Y3B2 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
EXOSC1Q9Y3B2 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
EXOSC1Q9Y3B2 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
EXOSC1Q9Y3B2 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
EXOSC1Q9Y3B2 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EXOSC1Q9Y3B2 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
EXOSC1Q9Y3B2 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EXOSC1Q9Y3B2 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
EXOSC1Q9Y3B2 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
EXOSC1Q9Y3B2 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.38■□□□□ 0.69
EXOSC1Q9Y3B2 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
EXOSC1Q9Y3B2 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
EXOSC1Q9Y3B2 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
EXOSC1Q9Y3B2 AC005703.6-201ENST00000623265 1329 ntBASIC19.38■□□□□ 0.69
EXOSC1Q9Y3B2 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.38■□□□□ 0.69
EXOSC1Q9Y3B2 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EXOSC1Q9Y3B2 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
EXOSC1Q9Y3B2 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.37■□□□□ 0.69
EXOSC1Q9Y3B2 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms