Protein–RNA interactions for Protein: Q9UN73

PCDHA6, Protocadherin alpha-6, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6Q9UN73 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
PCDHA6Q9UN73 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PCDHA6Q9UN73 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
PCDHA6Q9UN73 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC24.97■■□□□ 1.59
PCDHA6Q9UN73 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
PCDHA6Q9UN73 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC24.97■■□□□ 1.59
PCDHA6Q9UN73 RARRES2P6-201ENST00000567333 442 ntBASIC24.97■■□□□ 1.59
PCDHA6Q9UN73 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC24.97■■□□□ 1.59
PCDHA6Q9UN73 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC24.97■■□□□ 1.59
PCDHA6Q9UN73 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PCDHA6Q9UN73 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC24.97■■□□□ 1.59
PCDHA6Q9UN73 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC24.97■■□□□ 1.59
PCDHA6Q9UN73 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PCDHA6Q9UN73 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
PCDHA6Q9UN73 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
PCDHA6Q9UN73 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
PCDHA6Q9UN73 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHA6Q9UN73 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHA6Q9UN73 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHA6Q9UN73 LHPP-203ENST00000392757 840 ntTSL 3 BASIC24.96■■□□□ 1.59
PCDHA6Q9UN73 AC026271.2-201ENST00000428091 497 ntBASIC24.96■■□□□ 1.59
PCDHA6Q9UN73 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
PCDHA6Q9UN73 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC24.96■■□□□ 1.59
PCDHA6Q9UN73 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHA6Q9UN73 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHA6Q9UN73 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHA6Q9UN73 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHA6Q9UN73 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
PCDHA6Q9UN73 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC24.95■■□□□ 1.59
PCDHA6Q9UN73 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.59
PCDHA6Q9UN73 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC24.95■■□□□ 1.59
PCDHA6Q9UN73 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.59
PCDHA6Q9UN73 AC080038.3-201ENST00000623346 1952 ntBASIC24.95■■□□□ 1.58
PCDHA6Q9UN73 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
PCDHA6Q9UN73 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
PCDHA6Q9UN73 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC24.95■■□□□ 1.58
PCDHA6Q9UN73 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
PCDHA6Q9UN73 AC087239.1-201ENST00000622671 572 ntBASIC24.95■■□□□ 1.58
PCDHA6Q9UN73 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
PCDHA6Q9UN73 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC24.95■■□□□ 1.58
PCDHA6Q9UN73 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
PCDHA6Q9UN73 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC24.95■■□□□ 1.58
PCDHA6Q9UN73 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC24.94■■□□□ 1.58
PCDHA6Q9UN73 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
PCDHA6Q9UN73 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC24.94■■□□□ 1.58
PCDHA6Q9UN73 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC24.94■■□□□ 1.58
PCDHA6Q9UN73 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
PCDHA6Q9UN73 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PCDHA6Q9UN73 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PCDHA6Q9UN73 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PCDHA6Q9UN73 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
PCDHA6Q9UN73 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
PCDHA6Q9UN73 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHA6Q9UN73 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHA6Q9UN73 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHA6Q9UN73 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHA6Q9UN73 NME4-202ENST00000382940 766 ntTSL 3 BASIC24.93■■□□□ 1.58
PCDHA6Q9UN73 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC24.93■■□□□ 1.58
PCDHA6Q9UN73 AC012414.1-201ENST00000556676 535 ntBASIC24.93■■□□□ 1.58
PCDHA6Q9UN73 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC24.93■■□□□ 1.58
PCDHA6Q9UN73 NME4-211ENST00000620944 1193 ntTSL 2 BASIC24.93■■□□□ 1.58
PCDHA6Q9UN73 AL358852.1-201ENST00000623174 1268 ntBASIC24.93■■□□□ 1.58
PCDHA6Q9UN73 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC24.93■■□□□ 1.58
PCDHA6Q9UN73 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHA6Q9UN73 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC24.93■■□□□ 1.58
PCDHA6Q9UN73 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
PCDHA6Q9UN73 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
PCDHA6Q9UN73 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC24.92■■□□□ 1.58
PCDHA6Q9UN73 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC24.92■■□□□ 1.58
PCDHA6Q9UN73 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC24.92■■□□□ 1.58
PCDHA6Q9UN73 AK1-201ENST00000223836 736 ntTSL 3 BASIC24.92■■□□□ 1.58
PCDHA6Q9UN73 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
PCDHA6Q9UN73 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC24.92■■□□□ 1.58
PCDHA6Q9UN73 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC24.92■■□□□ 1.58
PCDHA6Q9UN73 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC24.92■■□□□ 1.58
PCDHA6Q9UN73 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC24.92■■□□□ 1.58
PCDHA6Q9UN73 AC105233.4-201ENST00000642045 216 ntBASIC24.92■■□□□ 1.58
PCDHA6Q9UN73 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
PCDHA6Q9UN73 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC24.92■■□□□ 1.58
PCDHA6Q9UN73 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
PCDHA6Q9UN73 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
PCDHA6Q9UN73 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHA6Q9UN73 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHA6Q9UN73 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
PCDHA6Q9UN73 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHA6Q9UN73 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHA6Q9UN73 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC24.91■■□□□ 1.58
PCDHA6Q9UN73 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHA6Q9UN73 SP2-202ENST00000613139 908 ntTSL 5 BASIC24.91■■□□□ 1.58
PCDHA6Q9UN73 MIR6084-201ENST00000622012 110 ntBASIC24.91■■□□□ 1.58
PCDHA6Q9UN73 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHA6Q9UN73 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHA6Q9UN73 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHA6Q9UN73 OXCT2P1-201ENST00000447263 1535 ntBASIC24.91■■□□□ 1.58
PCDHA6Q9UN73 GUSBP5-202ENST00000510805 1989 ntBASIC24.91■■□□□ 1.58
PCDHA6Q9UN73 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHA6Q9UN73 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHA6Q9UN73 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHA6Q9UN73 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
PCDHA6Q9UN73 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms